Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02802 ATGATTGTTGAGGAGGAAAGTAACAATAGAGGAGAATTTCAGGCTAGTTTAGCTAAACTCTCTTCATTAAGGTCAGGTGGAAGTTTTAAATCAACGTTATCTGGAAGATCAACTCCACGAAATTCTCCTACATTTCGAAGATTAAATACTAGTCGAACACCGAGGAAAGATGGAAGGAGTGTTGGTAGTTCACTGTGGTTTCGGAGCAATCGTGTGTTATTGTGGTTGCTTTTGATTACCCTTTGGGCTTATCTTGGGTTTTTTGTTCAGTCCAGGTGGGCACATAGCGATAAGAAGGAGGAATTTTCTGGCTTTGGAACCGGGCCGAGAAATACCGGCTCAAATGATGATTCGACGAGTCTTCGCCGTGATTTAATTGCTAGTGAGGACTCCTTGTCTGTTAATAATGAGACTGTTATAAATAAAGGAGGGGTTGGTAGAACAATAAATGTAGCTTTGGCGATGAAAGGAAatgatgatgatgatgatgatgTTCCAtctcgtcgtaaagcaagctcgaagaagaagaagagcaagcgttCTTCGAGAGGTAAAGCCCGTGGTAAGAATAAACCAAAAGTGGAAATTAAGAACAATGATATAGAGGAGCAGGAACCAGAAATTCCTGAAACCAATAGTACATACGGATTACTCGTTGGTCCATTTGGCTCAACGGAGGATAGGATTTTGGAATGGAGTCCTCAGAAACGTTCTGGGACATGTAATAGAAAGGGGGACTTTGCACGTCTTGTTTGGTCGAGAAGATTTATTTTGATATTCCATGAGCTTTCCATGACCGGAGCTCCACTTTCAATGATGGAGTTGGCAACAGAGCTTCTGAGCTGTGGGGCCACTGTTTCAGCTGTTGCCCTTAGCAGGAAGGGTGGTTTGATGTCAGAGCTTGCGAGACGACGAATCAAGCTGCTTGAGGACAAAGCAGATCTCAGCTTCAAAACTGCAATGAAGGCTGATCTTGTAATTGCTGGTTCAGCTGTATGTGCATCATGGATTGAACAATATATTGAGCATTTTCCTGCTGGTGCGAGCCAAGTTGCTTGGTGGATTATGGAAAACCGTCGAGAGTACTTCAACCGTACAAAGGGTGTCTTGGACAGAGTAAAGATGTTGGTTTTTCTTTCGGAATCCCAATCTAAACAATGGCAAAAATGGTGTGAAGAAGAAAATATAAAACTGAGATCCCGCCCTGAAATTATTCCTTTGTCTGTGAATGATGAACTGGCATTTGTAGCTGGCATTCCTTCTACACTTAACACTCCATCCTTTGATACTGATAAAATGATTGAGAAGAAACAGTTGTTGCGAGAATCAGTCCGGAAAGAAATGGGGTTAACTGATCATGATATGCTTGTGATATCATTGAGTAGCATCAACCCCGGTAAGGGCCAGCTATTGCTTCTTGAATCGGCAATCTCAGTAGTAGAACATGGACAGTTGCAAGATGATAAGAAAATGAAAAAATCGTCAAATATAAAGGAAGGCCTATCTACTCTGACTAGAAAACAACGTATTAGAAAATTGTTACCGATGCTGAAGGATGGCAAAGTAGCTTTGAAGGACATCTCAATCAATTCTTTAAGCAGAAGGAAACAAGTGTTGCCTAATAACAAAACAACAACGCAACAATCTCTCAAAGTTCTTATTGGCTCTGTTGGATCTAAAAGTAACAAGGCGGATTATGTTAAAAGCCTTCTAAGTTTCTTAGCACAGCATCCAAACACTTCAAAAACAGTTTTGTGGACTCCATCCACAACACAGGTTGCCTCACTATACTCTGCTGCAGATGTTTATGTCATAAACTCTCAGGGACTTGGAGAGACATTCGGACGGGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTTCTTGGAACGGATGCCGGGGGAACGAAGGAGATAGTTGAGAACAATGTTACAGGTCTTCTTCATCCAGTTGGACGTGCAGCAGGAAACGATGTCCTTGCACAGAATCTTGTGTATTTACTTAAAAACCAGTTGGCAAGGAAGCAAATGGGAATGGAAGGAAGAAAGAAGGTGGAGAGGATGTATTTGAAGCAACACATGTATAAGAAATTTGTTGAGGTTATTGTTAGGTGCATGAGAAACAAATAA 2130 0.4023 MIVEEESNNRGEFQASLAKLSSLRSGGSFKSTLSGRSTPRNSPTFRRLNTSRTPRKDGRSVGSSLWFRSNRVLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTGSNDDSTSLRRDLIASEDSLSVNNETVINKGGVGRTINVALAMKGNDDDDDDVPSRRKASSKKKKSKRSSRGKARGKNKPKVEIKNNDIEEQEPEIPETNSTYGLLVGPFGSTEDRILEWSPQKRSGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVALSRKGGLMSELARRRIKLLEDKADLSFKTAMKADLVIAGSAVCASWIEQYIEHFPAGASQVAWWIMENRREYFNRTKGVLDRVKMLVFLSESQSKQWQKWCEEENIKLRSRPEIIPLSVNDELAFVAGIPSTLNTPSFDTDKMIEKKQLLRESVRKEMGLTDHDMLVISLSSINPGKGQLLLLESAISVVEHGQLQDDKKMKKSSNIKEGLSTLTRKQRIRKLLPMLKDGKVALKDISINSLSRRKQVLPNNKTTTQQSLKVLIGSVGSKSNKADYVKSLLSFLAQHPNTSKTVLWTPSTTQVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTKEIVENNVTGLLHPVGRAAGNDVLAQNLVYLLKNQLARKQMGMEGRKKVERMYLKQHMYKKFVEVIVRCMRNK 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02802 709 Pfam Glycosyl-transferase family 4 252 421 IPR041693 -
Car01g02802 709 MobiDBLite consensus disorder prediction 156 215 - -
Car01g02802 709 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 262 702 - -
Car01g02802 709 MobiDBLite consensus disorder prediction 25 61 - -
Car01g02802 709 Pfam Glycosyl transferases group 1 570 683 IPR001296 GO:0016757
Car01g02802 709 Gene3D Glycogen Phosphorylase B; 429 689 - -
Car01g02802 709 MobiDBLite consensus disorder prediction 188 204 - -
Car01g02802 709 MobiDBLite consensus disorder prediction 100 120 - -
Car01g02802 709 MobiDBLite consensus disorder prediction 156 170 - -
Car01g02802 709 CDD GT4_PimA-like 257 702 - -
Car01g02802 709 MobiDBLite consensus disorder prediction 171 187 - -
Car01g02802 709 PANTHER BNAA05G14870D PROTEIN 5 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02802 Car-Chr1 53297613 53301728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02802 27 707 Glycosyltransferase AT3G15940 61.650 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02802 - - mtr:MTR_2g102283 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02802 01 53297613 53301728 Car01g02802 01 53297613 53301728 ECH
Car01g02802 01 53297613 53301728 Car06g02397 06 26368404 26372258 PCT