Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02395 ATGATGGAGCTTATTTCCGGTCTACCTGAAGATTTAGCCAGAGACTGTCTAATTCGGGTTTCATACCAACAATTTCCCACGGTGGCGTCGGTTTGTAAAGGGTGGAAGACGGAGATACTTACGCCGGAGTATCACCGTCAACGACGGAGAACGGGACAAGCTCAAAAAGTTCTAGTTATGGTTCAAGCACGTATTGAACCGGATAAAAGTGAAACCGGTTCGACGAAAAGACTTACAAACCCGGTTTACCGGCTCAGTGTTTTTGAACCGGAAAAAAGTACTTGGAGTGAATTACCGGCACCACCCGGTTATAGTTCAGGGTTACCGGTTATGTGTCAGTTAGCTTGTGTCGGATATGATCTTGTTGTGTTGGGCGGGTTGGATCCGGATACATGGAAAGCATCGAATTCAGTGTTTGTTTATAATTTCTTGTCGGCAAAATGGCGATGCGGGACCCAGATGCCAGGTGGATCCCGCATGTTTTTTGGTTGTGCATCAGATGCCCGTCGGATGATTTTTGTGGCCGGCGGACATGATGACGAGAAGAATGCGTTGAGGTCGGCATTGATGTATGATGTGGCGGTGGATGAATGGGTTGAGCTACCGGAGATGTCGTCGGAGCGTGATGAGTGTAAGGCGGTGTTTCGCCGTGGAAGGTTTATTGTCGTTGGTGGTTACACGACGGAGAATCAAGGAAGGTTTGAGAAAAGTGCGGAGGTTTTTGATTTTGTGACGTGGAAGTGGGGTCAAGTGGAGAAAGAGTTTTTGGATTGTGCCACGTGTCCAATGACTTTGGTGAACGGTGGTGATTGTGATGAGAGTGTTTATATGTGTTGCGGTGGTGAGTTAGTTACCATGAGGGGTCACACGTGGCAGAAGATGGGTAAGGTTCCGGATGAGATCCGCAACGTTGCTTATGTTGGAGCGTTTGGTGGGGCTGTGGTTGTGATTGGATCTAACGGCTATGGTGAAGTGCACATGGGTTATGTTTTTGATTTGAGGAGTTATAAATGGAGAAAATTGGACTGTCCAAAAGGGTTCACTGGACATGTCCAAACCGGATGTGTACTAGAAATTTAA 1080 0.4722 MMELISGLPEDLARDCLIRVSYQQFPTVASVCKGWKTEILTPEYHRQRRRTGQAQKVLVMVQARIEPDKSETGSTKRLTNPVYRLSVFEPEKSTWSELPAPPGYSSGLPVMCQLACVGYDLVVLGGLDPDTWKASNSVFVYNFLSAKWRCGTQMPGGSRMFFGCASDARRMIFVAGGHDDEKNALRSALMYDVAVDEWVELPEMSSERDECKAVFRRGRFIVVGGYTTENQGRFEKSAEVFDFVTWKWGQVEKEFLDCATCPMTLVNGGDCDESVYMCCGGELVTMRGHTWQKMGKVPDEIRNVAYVGAFGGAVVVIGSNGYGEVHMGYVFDLRSYKWRKLDCPKGFTGHVQTGCVLEI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02395 359 Pfam F-box domain 5 37 IPR001810 GO:0005515
Car06g02395 359 Gene3D - 44 348 IPR015915 GO:0005515
Car06g02395 359 SUPERFAMILY Kelch motif 80 342 IPR015915 GO:0005515
Car06g02395 359 Pfam Kelch motif 172 205 IPR006652 GO:0005515
Car06g02395 359 Pfam Kelch motif 114 155 IPR006652 GO:0005515
Car06g02395 359 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 2 359 - -
Car06g02395 359 SMART kelc_smart 171 218 IPR006652 GO:0005515
Car06g02395 359 SMART kelc_smart 120 169 IPR006652 GO:0005515
Car06g02395 359 PANTHER OS02G0208700 PROTEIN 2 359 IPR044595 GO:0080037|GO:2000762
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02395 Car-Chr6 26331901 26333747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02395 8 212 Miscellaneous Gene Families AT4G33900 25.463 2.47e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02395 - - gmx:100796602 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02395 06 26331901 26333747 Car06g02395 06 26331901 26333747 ECH
Car01g02803 01 53302354 53304245 Car06g02395 06 26331901 26333747 PCT