Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02803 ATGGAGTTGATTTCAGGTTTACCAGAAGACATAGCACGAGAGTGTTTGATTCGAGTTTCATACCAACAATTTCCGGCGGTTGCTTCCGTCAGCAAAGGGTGGAAAACGGAGATTCAGATGCCGGAGTTTCGGCGTCTGAGGAAGAACACAGGGCATGTTCAGAAAATCCTCGTCACGGTTCAGTCCCGGTTCGATTCAGAAAAATACAAAACCGGTTTATTAGTGAAGGCTATGACGAACCCGGTTTATAAGCTAAGTGTATTAGAAACCGAAACGGGTATTTGGAGCGAGTTACCACTGGGACCCGAATTAAGTGACGGGTTACCCTTATTTTGTCAAATAGCGGGTGTCGGATATGATCTTGTTGTTATGGGTGGGTGGGCCCCAGATTCATTTAAAGCTTCAAATTCGGTGTTTATTTATAATTTTTTATCGGCTAAGTGGCGCCGTGGAGCCGATATGCCAGGTGGGCCCCGCACCTTTTTTTCCTGTACGTCTGATCACGATCGTATGGTGTACGTTGCGGGAGGACACGACGAAGAGAAAAACGCGTTAAAGTCAGCTTTTGCTTATGACGTGGCAAATGACGTGTGGATCCCTCTCCCCGACATGTCGAGGGAGCGGGACGAGTGTAAGGCTGTATTTCGCCGCGGAAACACCGGCGGCGGTAAGGTGCGCATCGTTGGTGGATATTGCACGGAGATGCAGGGGAGATTTGAACGGAGTGCGGAGGAGTTCGATGTTGACACGTGGAAGTGGGGTCCAGTGGTGGAGGAGTTTTTGGATGAGTCCACGTGTCCGAGGACTTGTGTGGATGGTTGTGACGTGGAGGGGAGAATGTACATGTGTAAGGGTGGTGACGTGGTTGTGTTGGAAGGTGACACGTGGAAGGAAGTGGCGAAGATGCCGAAAGAGATAAATAACGTTGCGTGCTTGGGAGCGTGGGAAGGGTCATTGTTGTTGATTGGGTCGAGTGGGTTTGGGCAACCTAATATGGGCTTTGTATTGGATCTCAAGAGTGGTGCTTGGGCTAAACTTGTGAGCCCAGAAAATTACTGTGGTCACGTGCAGTCTGGTTGCCTTTTGGAGATTTAG 1095 0.495 MELISGLPEDIARECLIRVSYQQFPAVASVSKGWKTEIQMPEFRRLRKNTGHVQKILVTVQSRFDSEKYKTGLLVKAMTNPVYKLSVLETETGIWSELPLGPELSDGLPLFCQIAGVGYDLVVMGGWAPDSFKASNSVFIYNFLSAKWRRGADMPGGPRTFFSCTSDHDRMVYVAGGHDEEKNALKSAFAYDVANDVWIPLPDMSRERDECKAVFRRGNTGGGKVRIVGGYCTEMQGRFERSAEEFDVDTWKWGPVVEEFLDESTCPRTCVDGCDVEGRMYMCKGGDVVVLEGDTWKEVAKMPKEINNVACLGAWEGSLLLIGSSGFGQPNMGFVLDLKSGAWAKLVSPENYCGHVQSGCLLEI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02803 364 SMART kelc_smart 171 218 IPR006652 GO:0005515
Car01g02803 364 SMART kelc_smart 120 168 IPR006652 GO:0005515
Car01g02803 364 PANTHER OS02G0208700 PROTEIN 1 364 IPR044595 GO:0080037|GO:2000762
Car01g02803 364 SUPERFAMILY Kelch motif 81 346 IPR015915 GO:0005515
Car01g02803 364 Pfam Kelch motif 109 159 - -
Car01g02803 364 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 364 - -
Car01g02803 364 Pfam F-box domain 4 40 IPR001810 GO:0005515
Car01g02803 364 Pfam Kelch motif 169 205 IPR006652 GO:0005515
Car01g02803 364 Gene3D - 48 355 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02803 Car-Chr1 53302354 53304245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02803 7 288 Miscellaneous Gene Families AT4G33900 24.000 1.78e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02803 - - gmx:100786398 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02803 01 53302354 53304245 Car01g02803 01 53302354 53304245 ECH
Car01g02803 01 53302354 53304245 Car06g02395 06 26331901 26333747 PCT