Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02394 ATGGGTGCTTCACTGCCTCCTAAAGAGGCCAATCTCTTCAAGCTTATTGTTAAATCATATGAAACCAAGCAATATAAAAAGGGCCTCAAGGCAGCTGATGCTATTTTGAAAAAATTTCCGGACCATGGAGAAACTTTATCAATGAAGGGTTTGACATTAAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGATTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTCCTTTATCGGTCAGATAGAGAATATAGGGAGGCAATCAAGTGCTATCGAAATGCACTGCGAATAGATCCTGACAATATTGAAATTCTGCGTGACTTATCACTCTTACAGGCTCAGATGAGAGATTTATCTGGCTTTGTTGAGACTAGACAACAGCTTTTGACTCTTAAGCCCAATCATCGCATGAACTGGATTGGCTTTTCGGTTGCCCACCATTTAAACTCGAATGCGTCCAAGGCCGTGGAGATTTTGGAAGCATATGAAGGGACTTTAGAAAATGATTTTCCTCCAGATAATGAGCGGTGTGAGCATGGGGAAATGCTTTTATATAAGATCTCTTTGTTGGAGGAATGCGGATTTCTTGAGAGAGCTCTTGAAGAGTTGCGCCAAAAAGAATCAAATATTGTTGATAAACTTGCAGTTAAAGAGCAAGAGGTTTCACTTGTAGTGAAGCTTGGTCATTTAGTAGAAGCAGAATCGCTGTACAGGGCATTACTTTCCATGAATCCTGATAATTATAGATACTATGAGGGTCTCCAAAAGTGTGTTGGATTGTATTTAGAAGATGGGAAGTACTCTCCTGATCAAATAGATCGGTTAGTTTCCTTGTATGAAACACTTGGGCGGCAATATAAGTGGTCTTCTGCAGTTAAGAGAATACCCCTGGATTTTTTACAAGGTGACAAATTTCGAGAAGCAGCAGACAATTATATTAGGCCTCTCTTAACTAAGGGAGTTCCATCTCTGTTCTCTGATCTTTCTTCTTTGTACAATCATCCCGGGAAGGCAGACATTTTGGAACAACTTATTCTTGAGTTAGAGCATTCAATTAGGACATCAGGCCAATATCCTGGGAGTATGGAAAAAGAAGCCCCTTCAACTCTTTTGTGGACTTTGTTTTTCTTGGCTCAGGTTCGTGGTAACAGTTTGGTATTTAGATTCATTTTGCCCGCTTCTTTCACTAAGCAATTTTTGCTGGTGCAGCATTATGACAGGCGTGGCCAATATGAGACTTCCCTTTCTAAAATCGATGAGGCTATAGAACATACACCTACTGTCATTGATCTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGAAAGCTGCTGCTGCATTTGCAGATGAAGCAAGGCGTATGGACCTTGCTGATCGTTATGTTAATAGCGATTGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAATTGCTGTGTTATTCACAAAAGATGGGGAGCAACATAACAACCTTCATGACATGCAATGCATGTGGTTGGTATACGATGATGTATTAATATTCTGCATTATACAATCTACATTGTGGCCTAATTTCTTAATGCTTGTTGTAACATCTATATTTGCAAGGTATGAGCTTGCCTCGGGTGAAAGCTATTTCCGCCAGGGAGATCTTGGACGGGCTCTCAAGAAATTTTTAGCCGTGGAGAAGCATTATGCTGATATTACTGAGGACCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACTTTGCGTAGTTATGTTGAAATGCTTAAATTTCAAGACCAATTGCACTCACATGCATATTTTCATAAAGCAGCAGCAGGAGCTATCAGATGTTATATTAAGTTGCATGATTTCCCCCCAAAGTCTACGGCAGAGGAAGATGAGCATATGTCAAACTTGCTTCCTTCTCAGAAAAAGAAATTGAGAcaaaagcaaagaaaagcagaagcaagagcaaaGAAAGAGGCAGAAGAAAAGAATGAAGAATCAAATGCTAGTGGGGTATCGAAGTCTGGGAAACGACATGTAAAACCTGTTGATCCTGATCCACATGGGGAGAAGTTATTGCAGGTTGAAGATCCATTGTCTGAAGCTGTTAAATACTTGAAGTTACTGCAGAAGAATTCACCTGATTCACTGGAAACACATTTGCTCTCTTTTGAATTATATACAAGGAAACGGAAGATTTTGCTTGCCTTTCAGGCTGTGAAGCAGTTATTAAGGTTGGATGCTGACCACCCTGATTCTCATCGTTGTTTGATTAAATTTTTCCATCAATTGGGATCCACAAGTGCTCCGGAGACTGAAAGCGAGAAATTGATATGGAGTGTCTTAGAAGCTGAGCGCCCAACTATTAGTCAACTGCATGAGAAATCTCTTTTTGACGCAAACAATGCTTTCCTTGACAATCATAAAGATTCTTTGATGCATAGAGCAGCTTTTACAGAAATCTTGTACATTTTGGATTCTAACAGAAAGTCTGAGGCTGTCAAGTTGATTGAAGAGTCAACAAATAATAGTTTGCCAAGAAATGGAACAATTGAACCAATCAGGGAATGGAAACTTAAAGACTGTATTGCTGTTCACAAGCTTCTCGGAACAGTACTTGTTGACCAGGATGCGGCATTGAGGTGGAAAGTGAGTTGTGCAGAGTACTTCCCCTATTCGACGTACTTTGAGGGAAGACACAGCTCTGCCTCTCCCAACTCGGCCTTTAACCAGTTACGCAAAAACTCCGAAAATGACATTGCTAACCATTCAGTTGATATGCAAGTGAATTGGTTTGGGTGCATGGTAAACCAAACTGCATTTTACACTCCCAGAAACGACCTTGTTGCAATTTGCAGCACGTGTCACAGTTTTGGGGCTCCAAAGATTTGCATCATTATCTGA 2931 0.3988 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLENDFPPDNERCEHGEMLLYKISLLEECGFLERALEELRQKESNIVDKLAVKEQEVSLVVKLGHLVEAESLYRALLSMNPDNYRYYEGLQKCVGLYLEDGKYSPDQIDRLVSLYETLGRQYKWSSAVKRIPLDFLQGDKFREAADNYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELEHSIRTSGQYPGSMEKEAPSTLLWTLFFLAQVRGNSLVFRFILPASFTKQFLLVQHYDRRGQYETSLSKIDEAIEHTPTVIDLYSVKSRILKHAGDLKAAAAFADEARRMDLADRYVNSDCVKRMLQADQVALAEKIAVLFTKDGEQHNNLHDMQCMWLVYDDVLIFCIIQSTLWPNFLMLVVTSIFARYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRSYVEMLKFQDQLHSHAYFHKAAAGAIRCYIKLHDFPPKSTAEEDEHMSNLLPSQKKKLRQKQRKAEARAKKEAEEKNEESNASGVSKSGKRHVKPVDPDPHGEKLLQVEDPLSEAVKYLKLLQKNSPDSLETHLLSFELYTRKRKILLAFQAVKQLLRLDADHPDSHRCLIKFFHQLGSTSAPETESEKLIWSVLEAERPTISQLHEKSLFDANNAFLDNHKDSLMHRAAFTEILYILDSNRKSEAVKLIEESTNNSLPRNGTIEPIREWKLKDCIAVHKLLGTVLVDQDAALRWKVSCAEYFPYSTYFEGRHSSASPNSAFNQLRKNSENDIANHSVDMQVNWFGCMVNQTAFYTPRNDLVAICSTCHSFGAPKICIII 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02394 976 PIRSF NAT_A 402 524 IPR021183 -
Car06g02394 976 PIRSF NAT_A 1 390 IPR021183 -
Car06g02394 976 PIRSF NAT_A 545 873 IPR021183 -
Car06g02394 976 SUPERFAMILY TPR-like 21 262 IPR011990 GO:0005515
Car06g02394 976 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 408 515 - -
Car06g02394 976 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 547 930 - -
Car06g02394 976 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 388 - -
Car06g02394 976 SMART tpr_5 77 110 IPR019734 GO:0005515
Car06g02394 976 SMART tpr_5 43 76 IPR019734 GO:0005515
Car06g02394 976 SMART tpr_5 545 578 IPR019734 GO:0005515
Car06g02394 976 PANTHER BNAC02G23120D PROTEIN 408 515 - -
Car06g02394 976 PANTHER BNAC02G23120D PROTEIN 547 930 - -
Car06g02394 976 Pfam TPR repeat 84 123 - -
Car06g02394 976 MobiDBLite consensus disorder prediction 636 701 - -
Car06g02394 976 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Car06g02394 976 MobiDBLite consensus disorder prediction 686 701 - -
Car06g02394 976 SUPERFAMILY TPR-like 405 762 IPR011990 GO:0005515
Car06g02394 976 Gene3D - 2 392 - -
Car06g02394 976 Gene3D - 402 521 - -
Car06g02394 976 Gene3D - 560 780 - -
Car06g02394 976 MobiDBLite consensus disorder prediction 661 677 - -
Car06g02394 976 Pfam N-terminal acetyltransferase A, auxiliary subunit 407 519 IPR021183 -
Car06g02394 976 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 388 IPR021183 -
Car06g02394 976 Pfam N-terminal acetyltransferase A, auxiliary subunit 547 751 IPR021183 -
Car06g02394 976 Coils Coil 195 229 - -
Car06g02394 976 PANTHER BNAC02G23120D PROTEIN 10 388 - -
Car06g02394 976 Coils Coil 651 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02394 Car-Chr6 26260493 26280657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02394 K20792 - gmx:100820094 1526.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02394 06 26260493 26280657 Car06g02394 06 26260493 26280657 ECH
Car01g02806 01 53316438 53329621 Car06g02394 06 26260493 26280657 PCT