Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02806 ATGGGCGCTTCTCTTCCTCCCAAGGAGGCTAACCTCTTCAAACTCATTGTTAAATCCTATGAAACTAAACAATACAAAAAGGGACTCAAAGCAGCCGATGCCATTTTGAAAAAATTTCCAGATCATGGAGAAACTTTATCGATGAAGGGTTTGACATTAAATTGCATGGATCGTAAATCTGAAGCATATGAACTGGTTCGCCAAGGATTGAAGAACGACCTTAAGAGTCATGTTTGCTGGCATGTTTATGGTCTTCTCTATCGGTCAGACAGAGAATACAGGGAAGCAATCAAGTGCTATCGAAATGCACTAAGGATAGATCCTGACAATATTGAAATCCTACGGGACCTATCTCTCTTACAGGCTCAAATGCGAGATTTAACTGGCTTTGTTGAGACAAGGCAACAACTTCTGACTCTCAAGTCAAATCATCGCATGAACTGGATTGGCTTTTCTGTTGCACATCATTTGAACTCAAATGCATCAAAAGCTATTGAAATTCTGGAAGCATATGAAGGGACATTAGAAGATGATTATCCTCCAGAAAATGAACGGATTGAGCATGGGGAAATGCTTTTATATAAGGTCTCTTTGTTAGAGGAATGTGGATCTTTTGAGAGAGCTCTTGAGGAGTTGCAGAAGAAGGAGTCAAAAATTGTTGATAAGCTTGGATATAAAGAACAAGAGGTTTCACTTTTAGTCAAGCTTGGTCGCTTAGAAGAAGGCGAGAAATTGTACCAGGCATTGCTTTCTATGAATCCTGACAATTACAGTTATTATGAAGGCCTTCAACGATGTGTTGGGTTATATTCAGAAAATGGCCATTTTTCTCCCGATGAAATAGATCGGTTAGATACATTGTACAAAACACTTGGGCAGCAATTTAAGTGGTCATCTGCTGTTAAGAGAATACCTTTAGATTTTCTACATGGTGACAGATTTCGAGAAGCAGCAGATAGTTATATTAGGCCGCTCCTAACTAAGGGAGTTCCATCTCTATTCTCAGATCTTTCTTCTTTATACAATCACCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTCGAGTTAGAGAATTCTATTAGGACAACTGGTCAATACCCTGGGAGGGAGGAAAAAGAGCCTCCTTCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAAGCGGAGCCAATATGAAATTGCTCTTTCTAAAATCAACGAGGCTATAGAACACACACCTACCGTCATTGATCTATACTCTGCCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGCCTGCCGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTCGGTGATCGTTATGTTAATAGTGACTGTGTGAAACGCATGCTGCAGGCTGATCAGATGGTTTTGGCAGAAAAAACTGCCGTGCTATTCACCAAAGATGGGGATCAACACAACAACCTCCATGACATGCAGTGCATGTGGTACGAGCTTGCCTCTGCTGAAAGCTACTTCCGCCAAGGGGATCTTGGACTGTCTCTAAAAAAATTCTTAGCAGTGGAGAAGCATCATGCAGATATTACTGAAGACCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGAACATATGTGGAAATGCTTCAATTTCAAGACAGATTGCATTCACATGCATATTTTCATAAAGCAGCAGCTGGAGCTGTCAGATGTTATATAAAGTTGCACGATTCTCCTCCAAAGTCAACAGCCGAGGAGGATAATGAAATGTCTAAGTTGCTTCCTGCTCAGAAAAAGAAAATCAGGCAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAAAAAGAGGCAGAAGAAAAAAATGAAGAATCAAGTGGCAGTGGGATATCGAAGTCTGGGAAACGTCACACTAAACCTGTTGATCCAGATCCTCGAGGGGAAAAGTTGTTGCAGGTTGAAGATCCATTGTTGGAAGCCACAAAGTACTTGAAGTTGCTGCAGAAGAATTCACCTGATTCACTGGAGACACACTTGCTCTCCTTTGAATTATACATGAGAAAACATAAGATTTTGTTGGCCTTCCAGGCTCTAAAGCAGTTGCTGAGGTTGGATGCTGAACACCCTGATTCTCATCGATGCTTGGTAAAATTCTTCCATAAAGTGGGATCCATGAATGCTCCTGTGACTGACAGTGAGAAACTCGTTTGGAGTGTCTTAGAAGCTGAGCGCCAAACTATAAGTCAGCTGCATGGGAAATCTCTTTTTGAGGCAAATAACTTTTTCCTTGAAAAACATGAAGGTTCTTTGATGCATAGAGCTGCTTATGGAGAAATGATGTACATTTTAGATCCCAATAGAAGAACTGAGGTTGTCAAGTTGATTGAAGAGTCAACAGATAACCTTGTGTCAAGAAATGGTGCACTTGGACCAATCCGTGAATGGAGACTTAAAGACTGTATTGCGGTTCATAAACTTCTTGGATCAGTCCTTCTTGATCAGGAAGCTGCATTGAGATGGAAAGTGCGTTGTGCTGAGTTTTTCCCATACTCTACCTACTTTGAGGGTAGTCAAAGCTCTGCCTCACCCAACTCTGCTCTCAATCAAATATGCAAGACCACTGTAAATGGGAATTCTAGCCATTCACTCAGCGATCATGCAGAATCTGTCACATCAAATGGCAAAGTAGAAGCATTTAAAGATCTCACTATTTGA 2703 0.4099 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKSNHRMNWIGFSVAHHLNSNASKAIEILEAYEGTLEDDYPPENERIEHGEMLLYKVSLLEECGSFERALEELQKKESKIVDKLGYKEQEVSLLVKLGRLEEGEKLYQALLSMNPDNYSYYEGLQRCVGLYSENGHFSPDEIDRLDTLYKTLGQQFKWSSAVKRIPLDFLHGDRFREAADSYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELENSIRTTGQYPGREEKEPPSTLMWTLFLLAQHYDKRSQYEIALSKINEAIEHTPTVIDLYSAKSRILKHAGDLPAAAAFADEARCMDLGDRYVNSDCVKRMLQADQMVLAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESYFRQGDLGLSLKKFLAVEKHHADITEDQFDFHSYCLRKMTLRTYVEMLQFQDRLHSHAYFHKAAAGAVRCYIKLHDSPPKSTAEEDNEMSKLLPAQKKKIRQKQRKAEARAKKEAEEKNEESSGSGISKSGKRHTKPVDPDPRGEKLLQVEDPLLEATKYLKLLQKNSPDSLETHLLSFELYMRKHKILLAFQALKQLLRLDAEHPDSHRCLVKFFHKVGSMNAPVTDSEKLVWSVLEAERQTISQLHGKSLFEANNFFLEKHEGSLMHRAAYGEMMYILDPNRRTEVVKLIEESTDNLVSRNGALGPIREWRLKDCIAVHKLLGSVLLDQEAALRWKVRCAEFFPYSTYFEGSQSSASPNSALNQICKTTVNGNSSHSLSDHAESVTSNGKVEAFKDLTI 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02806 900 Gene3D - 2 503 - -
Car01g02806 900 MobiDBLite consensus disorder prediction 577 646 - -
Car01g02806 900 PANTHER BNAC02G23120D PROTEIN 10 884 - -
Car01g02806 900 Pfam N-terminal acetyltransferase A, auxiliary subunit 186 696 IPR021183 -
Car01g02806 900 MobiDBLite consensus disorder prediction 577 594 - -
Car01g02806 900 Coils Coil 195 215 - -
Car01g02806 900 SUPERFAMILY TPR-like 12 440 IPR011990 GO:0005515
Car01g02806 900 Pfam TPR repeat 84 123 - -
Car01g02806 900 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Car01g02806 900 MobiDBLite consensus disorder prediction 631 646 - -
Car01g02806 900 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 884 - -
Car01g02806 900 SMART tpr_5 77 110 IPR019734 GO:0005515
Car01g02806 900 SMART tpr_5 43 76 IPR019734 GO:0005515
Car01g02806 900 SMART tpr_5 380 413 IPR019734 GO:0005515
Car01g02806 900 PIRSF NAT_A 1 818 IPR021183 -
Car01g02806 900 Coils Coil 596 620 - -
Car01g02806 900 MobiDBLite consensus disorder prediction 606 622 - -
Car01g02806 900 Gene3D - 505 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02806 Car-Chr1 53316438 53329621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02806 K20792 - gmx:100776968 1550.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02806 01 53316438 53329621 Car01g02806 01 53316438 53329621 ECH
Car01g02806 01 53316438 53329621 Car06g02394 06 26260493 26280657 PCT