Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02383 ATGGATGGAGGTGATATATACAGAGCAAGTAGTAGTCTAAGAGGGAATAATTCTACAGTTTTTTCGAGATCCTCGCGGCACGATGAAGATGATGAGGAAGCTTTGAAATGGGCTGCACTTGAAAAACTACCTACTTACAATCGTGTAAGGAAAGGGTTGTTGATCACATCACATGGAGAAGCCAATGAGATTGATGTAACTAAACTTGGATTTCAAGAAAGACAGGAATTGTTGAACAGGCTGGTCAATGCTAATGAAAATGACAATGAGAATTTTTTATTGAGGCTCAAGGAAAGAATTGATAGAGTTGGGATTGATGTTCCAACAGTTGAAGTTCGTTATGAGCATCTAACTGTTGAGGCAGAAGCTTATGTAGGAAGTAGAGCTTTGCCTTCTTTCACTAACTTTACTATTGGTGCAGTGGAGAATATCCTTAGCTTTTTTCATATTCGATCAACCAAAAAGAAACATGTGACTATCCTTAAAGATGTTAGTGGAATAGTCAAACCTCAAaggatgacattgcttcttggtcctccaagttctggaaagaccacacttcttttggccttagcaggaaaacttgataaaactctcaaggtatctggtagagtgacatataatggacatggaatggaagaatttgtacctcagagaactgctgcatatattagccaaaatgatgttcatattggagaaatgactgtaagagaaaccttggctttctcagcaaggtgccaaggagttggaacgcgttatgatttgctatctgagttgattagaagagaaaaacaagcaaagatcaaaccagaaccagatattgatgtcttcatgaagGCAGCTGCAGCTGGAGGCCAGGAGGAAAGTCTGGTAATAGATTATATGCTGAAGatcttggggttggatgtatgtagtgatactattgtgggggatggaatgcggcgaggtatctcgggcggacaaaggaaaagagttacaacaggagagatgttggttggagcagcaaaagttctattaatggatgaaatatctactggcttggatagctccacaacttttcaaattgtgaaatctatcagacaatctattcacatttttagtggaactgcagttatctctttgttacagccagcaccagagacttatgaactttttgatgacattattcttttatctgatggtcaaattgtctaccaaggaccacttgaacatgttcttgaattctttgaatctcttggtttcaaatgtcctgataggaaagctgttgctgacttccttcaagaagtaacttcaaggaaggatcaagagcaatattgggtttgcagagaaaaaccatacaggtttgtaactgttactcaatttgctgaggcatttcagtcattccatgttgggaggagaattggagatgagcttgcaattccatttgacaagtctaagaatcacccagctgcattaaccactaaaaaatatggtgttgacaagaaggaacttttaaaggctaatttctcaagagagtatttgcttatgaaAAAGAATTCTTTTATTTACATCAGCAAGTTGTTTCAACTTTCTGCAACGGCAACaattgctatgacactttttctacgaactaatatgcacaaagattcattggatggtggaatagtttatcttggtgctttatttttctcattaataatgctaatgttcaatggaactattgagcttacaatgaccattgtaaagcttccaacattcttcaagcaaagagaccacttattttatcctgcatgggcatatgctattcccacatgggtcatcagaatccctgttacattgatagaagcttctatttgggtaatcatcacctactatccaattggatttgattcaaatgtttggagATGTTTAAAGCAGTTTTTGCTGCTGTTACTGATAAACCAGACAGCTTCTGGATTGTTCCGATCTATTGCAGCAATTTGTAGAGACTATGTTGTTGGTACCATAACTGGATTCTATGTACTTCTAATATTTGTCGCATCGGGTGGATTCGTTTTGGCAAAAAatgatattaagaagtggtggagttggggttactggatttcacctttaatgtatgcacaaaatgctgtagtggtgaatgaattccttggacacagttgggaccatGTTGCCCCAGATTTTGGACTGGGAAATCAAAATACGACATTGGGAATTCAAGTTTTGGAGTATCGTAACTTCTTCACACATGCAtattggtattggataggagttggtgcattaacaggatttatgttcttttggaacattatatactctattgctctcacttaccttggtcCATATAACAAGCAACAAGCAACAATAACAGAAGAATCAGAAGGTAGTAATACACCAAATGACAAAAATAGAGAAGTTGAATTACAACAATTAGAAAATTCTGGGAGATCTAATGCTATTATGGATTCTAGTACTGGGAAGAAAAGGGGAATGGTTCTACCTTTTGAACCATATTCTATCACATTTGATGAAATTGAATACTCCGTTAACACGCCACAAgaaatgaaagaccaaggtataatcgaggacaggttagttctgttgaagggtgttagtggtgcatttaggcccggtgttctcacagccttggtgggtgtcagtggagctggtaaaactactttgatggatgttttggctggtaggaaaactacgggtcatattgatgggagcataaaaatttctggctaccctaaaaatcaagatacatttgctagaatctctggctattgtgagcagaatgatatccactcccctcatgttactgtccatgagtccttactatattccgcatggcttcgtttacccacagaagttgattccaataccagaaagatatacgttgaggaaatcatggaactagtggagttgaatccattgaggaactcactagttggtttgcctggtgtgagtggtctttcaactgaacaacgcaagaggctgactattgcagttgaattagtggccaatccatccataattttcatggacgagcctacatctggtttagatgctagagctgctgcaattgttatgcgaaccgttaggaacacagttgacacaggaagaacagttgtttgtaccatccatcaaccaaatattgacatatttgaagcttttgatgacttattcctcttgaagcgcggaggacaagaaatatatgttgggccattgggtcgttattcgtgtcacttgatcaactattttgagagcattgaaggagttagtaaaatcaaagatggatataaccctgcaacatggatgttggaagtgacaagtccagcacaagaacttgctttaggtgttgattttcatgagatatacaaaaattctgacctatataggagaaataagcaacttatagaagaattgggtaaacctatccctggttcaaaggaatttcatttcccaactcaatactcacagccattttttatccaatgcttggcttgcttgtggaaacaaaatttgtcatattggcgcaactcaaattacactgctgtgagattttacttTGCTACTTTCATAGCATTGGTGTTTGGAACAATGTTTTGGAACCTTGGAAGCAAATTCACAACATCACAAGGCCTATATAATGCCCTTGGTTctatgtatggtgctgttctcttcattggggtacagaattcttcctcggtacaatcagtggtggatgttgaaagaactgtcttttatagagaaagagctgctggaatgtattctgctttaccctatgcagttgcacaggttgtagttgagctaccttatattttggcacaagccgtatcatatggtgtcatagtttatgccatgattggatttgagtggacagtaacaaaattcttttggtacttgtttttcatgtacttcacattttgctacttcaccttctatggcatgatgactgtggcattcaccccaaatcaccatattgctgcaataactgcagctgcattttatggactttggaatgtgttttcaggatttgtcattccaagacctaaaatgcctgtgtggtggaggtggtacgcttgggcagatcctgtggcttggaccttatatggattattttcatcacaatttggagacataacagccccaatgaaggatttggatggtctgacagtgcaagaatttataagaattgctttgggtatgaaacacgattttgtaggggtttgtgcagttgtgattgttgggatagcagtcttatttgcttttacttttgctgtatcaattaaggtctttagtttccaacaaagataa 4299 0.103 MDGGDIYRASSSLRGNNSTVFSRSSRHDEDDEEALKWAALEKLPTYNRVRKGLLITSHGEANEIDVTKLGFQERQELLNRLVNANENDNENFLLRLKERIDRVGIDVPTVEVRYEHLTVEAEAYVGSRALPSFTNFTIGAVENILSFFHIRSTKKKHVTILKDVSGIVKPQRMTLLLGPPSSGKTTLLLALAGKLDKTLKVSGRVTYNGHGMEEFVPQRTAAYISQNDVHIGEMTVRETLAFSARCQGVGTRYDLLSELIRREKQAKIKPEPDIDVFMKAAAAGGQEESLVIDYMLKILGLDVCSDTIVGDGMRRGISGGQRKRVTTGEMLVGAAKVLLMDEISTGLDSSTTFQIVKSIRQSIHIFSGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPLEHVLEFFESLGFKCPDRKAVADFLQEVTSRKDQEQYWVCREKPYRFVTVTQFAEAFQSFHVGRRIGDELAIPFDKSKNHPAALTTKKYGVDKKELLKANFSREYLLMKKNSFIYISKLFQLSATATIAMTLFLRTNMHKDSLDGGIVYLGALFFSLIMLMFNGTIELTMTIVKLPTFFKQRDHLFYPAWAYAIPTWVIRIPVTLIEASIWVIITYYPIGFDSNVWRCLKQFLLLLLINQTASGLFRSIAAICRDYVVGTITGFYVLLIFVASGGFVLAKNDIKKWWSWGYWISPLMYAQNAVVVNEFLGHSWDHVAPDFGLGNQNTTLGIQVLEYRNFFTHAYWYWIGVGALTGFMFFWNIIYSIALTYLGPYNKQQATITEESEGSNTPNDKNREVELQQLENSGRSNAIMDSSTGKKRGMVLPFEPYSITFDEIEYSVNTPQEMKDQGIIEDRLVLLKGVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTTGHIDGSIKISGYPKNQDTFARISGYCEQNDIHSPHVTVHESLLYSAWLRLPTEVDSNTRKIYVEEIMELVELNPLRNSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPNIDIFEAFDDLFLLKRGGQEIYVGPLGRYSCHLINYFESIEGVSKIKDGYNPATWMLEVTSPAQELALGVDFHEIYKNSDLYRRNKQLIEELGKPIPGSKEFHFPTQYSQPFFIQCLACLWKQNLSYWRNSNYTAVRFYFATFIALVFGTMFWNLGSKFTTSQGLYNALGSMYGAVLFIGVQNSSSVQSVVDVERTVFYRERAAGMYSALPYAVAQVVVELPYILAQAVSYGVIVYAMIGFEWTVTKFFWYLFFMYFTFCYFTFYGMMTVAFTPNHHIAAITAAAFYGLWNVFSGFVIPRPKMPVWWRWYAWADPVAWTLYGLFSSQFGDITAPMKDLDGLTVQEFIRIALGMKHDFVGVCAVVIVGIAVLFAFTFAVSIKVFSFQQR 1432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02383 1432 CDD ABCG_PDR_domain2 832 1068 IPR034003 -
Car06g02383 1432 Pfam Plant PDR ABC transporter associated 724 782 IPR013581 -
Car06g02383 1432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 855 1069 IPR027417 -
Car06g02383 1432 CDD ABCG_PDR_domain1 142 400 IPR034001 -
Car06g02383 1432 Pfam ABC-2 type transporter 497 709 IPR013525 GO:0016020|GO:0140359
Car06g02383 1432 Pfam ABC-2 type transporter 1159 1372 IPR013525 GO:0016020|GO:0140359
Car06g02383 1432 Gene3D - 848 1073 IPR027417 -
Car06g02383 1432 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 833 1085 IPR003439 GO:0005524
Car06g02383 1432 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 1432 - -
Car06g02383 1432 Gene3D - 145 453 IPR027417 -
Car06g02383 1432 Pfam ABC-2 type transporter 376 429 IPR043926 GO:0140359
Car06g02383 1432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 417 IPR027417 -
Car06g02383 1432 SMART AAA_5 870 1062 IPR003593 -
Car06g02383 1432 SMART AAA_5 170 395 IPR003593 -
Car06g02383 1432 Pfam ABC-transporter N-terminal 66 136 IPR029481 -
Car06g02383 1432 MobiDBLite consensus disorder prediction 1 26 - -
Car06g02383 1432 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 145 418 IPR003439 GO:0005524
Car06g02383 1432 Pfam ABC transporter 161 343 IPR003439 GO:0005524
Car06g02383 1432 Pfam ABC transporter 861 1013 IPR003439 GO:0005524
Car06g02383 1432 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 1432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02383 Car-Chr6 25942571 25952810 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02383 K08711 - gmx:100783377 2174.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02812 01 53394042 53400469 Car06g02383 06 25942571 25952810 PCT