LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car06g02372	ATGTTGCGGAGACTTATCTCTTCACAATTACTCAAAACCCTAACAActtcttcttcttcttctctccgatctccttctCCCGCCGTCGCTGTTTCTTTACACTCCCTCCGTTTCTCTACTCAATCCGATGACAGTAGTGCTATCAAAAAGAAGGTTGAGGATGTAGTGCCAATTGCTACTGGTCACGAGCGCGAGGAGATTCAGGCTCAACTTGAGGGTAGGGATATTCTTGAAATTGACCATCCTGAAGGTCCTTTCGGCACTAAGGACGAACCTGCTGTTGTTAAATCTTACTATGGTAAAAGGATAGTTGGATGCCCAGGTGGTGAAGGCGAGGATGAGCACGATGTTGTCTGGTTTTGGCTGGAGAAAGATAAACCTCACGAATGTCCCGTGTGTGCACAGTATTTTGTGCTCGAAGTGGTAGGACCTGGTGGATCACCTTATGGACACGATGATCATCATCACTAA	471	0.4331	MLRRLISSQLLKTLTTSSSSSLRSPSPAVAVSLHSLRFSTQSDDSSAIKKKVEDVVPIATGHEREEIQAQLEGRDILEIDHPEGPFGTKDEPAVVKSYYGKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGSPYGHDDHHH	156

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car06g02372	156	CDD	Cyt_c_Oxidase_Vb	47	144	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Car06g02372	156	SUPERFAMILY	Rubredoxin-like	48	145	-	-
	Car06g02372	156	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	156	-	-
	Car06g02372	156	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	156	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Car06g02372	156	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	47	146	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Car06g02372	156	Pfam	Cytochrome c oxidase subunit Vb	58	146	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Car06g02372	156	Gene3D	Cytochrome c oxidase, subunit Vb	48	142	IPR036972	GO:0005740\|GO:0005751\|GO:0006123

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car06g02372	Car-Chr6	25767851	25773148	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car06g02372	K02265		-	gmx:100780886	242.662

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car06g02372	06	25767851	25773148	Car01g02823	01	53491066	53494325	ECH
	Car06g02372	06	25767851	25773148	Car06g02372	06	25767851	25773148	ECH
	Car01g02823	01	53491066	53494325	Car06g02372	06	25767851	25773148	PCT