Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02366 ATGAGTAGGCCGGGAGATTGGAACTGCAGGTCGTGCCATCACCTAAATTTTCAAAGGCGCGATTCGTGCCAAAGATGTGGCGATTCAAAATTCGGAGAAAGAGTTGAGTATGGAACTTTTGGAGGAAGAGGAGGATCTTCATTTGGTTTAAGTGGCTCAGATGTTCGTCTAGGTGATTGGTACTGTGCTGCTGGTAATTGTGGTGCACATAACTTTGCTAGTCGTTTAAGTTGCTTCAAGTGTGGTGCTTTCAAAGATGAGTTAGTTGGAGGATATAATAATAACAATAGTGACATTTTGGGTTCAAGGGCTTTTGGTGGAAGTGGAAAACCAGGATGGAAATCCGGTGATTGGATGTGTAACAGATTAGGATGCAATGAACACAACTTTGCTAGCAGAATGGAATGTTTCAAATGCAGTGCGCCAAGAGACACATACTAG 441 0.4286 MSRPGDWNCRSCHHLNFQRRDSCQRCGDSKFGERVEYGTFGGRGGSSFGLSGSDVRLGDWYCAAGNCGAHNFASRLSCFKCGAFKDELVGGYNNNNSDILGSRAFGGSGKPGWKSGDWMCNRLGCNEHNFASRMECFKCSAPRDTY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02366 146 SUPERFAMILY Ran binding protein zinc finger-like 2 32 IPR036443 -
Car06g02366 146 SUPERFAMILY Ran binding protein zinc finger-like 51 86 IPR036443 -
Car06g02366 146 PANTHER OS02G0203700 PROTEIN 1 145 - -
Car06g02366 146 ProSitePatterns Zinc finger RanBP2-type signature. 118 139 IPR001876 -
Car06g02366 146 PANTHER ZINC FINGER PROTEIN 1 145 - -
Car06g02366 146 ProSiteProfiles Zinc finger RanBP2 type profile. 114 145 IPR001876 -
Car06g02366 146 ProSitePatterns Zinc finger RanBP2-type signature. 60 81 IPR001876 -
Car06g02366 146 ProSiteProfiles Zinc finger RanBP2 type profile. 3 32 IPR001876 -
Car06g02366 146 Pfam Zn-finger in Ran binding protein and others 114 143 IPR001876 -
Car06g02366 146 Pfam Zn-finger in Ran binding protein and others 58 83 IPR001876 -
Car06g02366 146 ProSiteProfiles Zinc finger RanBP2 type profile. 56 87 IPR001876 -
Car06g02366 146 Gene3D - 51 87 - -
Car06g02366 146 Gene3D - 110 145 - -
Car06g02366 146 Gene3D - 2 31 - -
Car06g02366 146 SUPERFAMILY Ran binding protein zinc finger-like 108 144 IPR036443 -
Car06g02366 146 ProSitePatterns Zinc finger RanBP2-type signature. 7 26 IPR001876 -
Car06g02366 146 SMART zf_4 116 142 IPR001876 -
Car06g02366 146 SMART zf_4 58 84 IPR001876 -
Car06g02366 146 SMART zf_4 5 29 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02366 Car-Chr6 25703881 25706149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02366 - - gmx:100499847 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00784 07 6928773 6930865 Car06g02366 06 25703881 25706149 ECH
Car01g01551 01 32387910 32389029 Car06g02366 06 25703881 25706149 ECH
Car06g02366 06 25703881 25706149 Car06g02366 06 25703881 25706149 ECH