Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02360 ATGCATACCATACACTTTGAGTGTATAGTTCCACTATCAATAACCAAAAACTCTCTCTTTACACACAAAACAACAACCCCATTATCCCTATTAACCTTATCATCATCATCTTCTCAAAATTCCACTGTTAGAACAAGAGCAGGTTGGTTTTTAGGTCTAACATCAGATAACAAGAAGAAGATGAATTTGCCTGATACTGTTAAAGCTGGTGACCCTGTTTTGCATGAGCCTGCTCAAGAAGTTGATATTAGTGAGATTAATTCTGAGAAAATTCAGAAAATTATTGATGATATGATTAGGGTTATGAGGAAAGCTCCTGGTGTTGGTTTAGCTGCTCCTCAAATTGGAATTCCTTATAGGATAATTGTTTTGGAAGATACCAAAGAGTATATTAGTTATGCCCCAAAGGAAGAAATAAAAGCACAAGATAGAAGACCTTTTGATCTTTTGGTGATCTTGAATCCCAAGCTGAAGAATAAGAGCAACAAAACTGCCCTATTTTTTGAAGGGTGTTTGAGTGTTGATGGATATAGAGCTATGGTGGAGCGATACCTTGACGTTGAAGTTACAGGTTTGGATCGTAATGGCGAACCAATCAAAATAACTGCTTCTGGATGGCAGGCCCGGGTTTTACAACATGAATGTGATCACTTGGATGGAACTCTATATGTTGATAAGATGGTACCTAGAACTTTCAGAATCATTGAAAATTTGGACCTACCTCTTGCACAAGGGAGCCCGAAACTTGGTCCTCGGTAA 759 0.3808 MHTIHFECIVPLSITKNSLFTHKTTTPLSLLTLSSSSSQNSTVRTRAGWFLGLTSDNKKKMNLPDTVKAGDPVLHEPAQEVDISEINSEKIQKIIDDMIRVMRKAPGVGLAAPQIGIPYRIIVLEDTKEYISYAPKEEIKAQDRRPFDLLVILNPKLKNKSNKTALFFEGCLSVDGYRAMVERYLDVEVTGLDRNGEPIKITASGWQARVLQHECDHLDGTLYVDKMVPRTFRIIENLDLPLAQGSPKLGPR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02360 252 PANTHER PEPTIDE DEFORMYLASE 35 252 IPR023635 GO:0042586
Car06g02360 252 PRINTS Peptide deformylase signature 96 125 IPR023635 GO:0042586
Car06g02360 252 PRINTS Peptide deformylase signature 169 180 IPR023635 GO:0042586
Car06g02360 252 PRINTS Peptide deformylase signature 181 199 IPR023635 GO:0042586
Car06g02360 252 PRINTS Peptide deformylase signature 200 229 IPR023635 GO:0042586
Car06g02360 252 Gene3D Peptide deformylase 61 250 IPR036821 -
Car06g02360 252 Hamap Peptide deformylase [def]. 62 238 IPR023635 GO:0042586
Car06g02360 252 SUPERFAMILY Peptide deformylase 59 235 IPR036821 -
Car06g02360 252 TIGRFAM pept_deformyl: peptide deformylase 67 229 IPR023635 GO:0042586
Car06g02360 252 CDD Pep_deformylase 67 223 IPR023635 GO:0042586
Car06g02360 252 PANTHER PEPTIDE DEFORMYLASE 35 252 - -
Car06g02360 252 Pfam Polypeptide deformylase 67 230 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02360 Car-Chr6 25644467 25648174 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02360 K01462 - pvy:116144916 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02360 06 25644467 25648174 Car06g02360 06 25644467 25648174 ECH
Car01g02845 01 53644932 53646925 Car06g02360 06 25644467 25648174 PCT