Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02845 ATGGAAGCGGCGCGGCGGGTGATGTCGCGTTTGCGAGTGGTTCCGCTACTGATGTTTTCAACCGGTGTCGTAACAGCCTCCTCACCTCGTAGCAAAACTCTACCAGCATCGAATACGAATGGTTTGAGGTTGAGCTCAGCATCATCACTAGGGTGGGGGTCTAAAAGAGTTAACAAATTTCCCCCCATTGTAAAAGCCGGAGACCCTGTTCTTCACGAACCTGCACGTGAGGTTCATCTTAGTGAAATTAAATCGGAGAAGGTGCAGAATATTATCGATGACATGATTCATGTCATGAGAAAAGCTCCTGGTGTTGGTCTCGCTGCTCCCCAAATTGGAATCCCCTTTAGGATAATTGTTTTGGAGGATAAAAAAGAATATATTAGTTACAACACAGAGGAGGAGATCAAATCACAAGATAGAAAACCTTTTGATCTTTTGGTGATTCTCAATCCTAGGCTAAAGAAGAAGAGCAACAAGACTGCCTTCTTTTTTGAAGGGTGCTTGAGTGTTGATCGATATCAAGCTATGGTAGAGCGTTACCTTGATGTTGAGGTTGCAGGTTTTGATCGTTACGGTGAACCTATCAAAATAAATGCTTCTGGTTGGCAGGCCCGGATTTTACAGCATGAGTGTGATCACCTGGATGGAACACTGTATGTTGATAAGATGGTACCTAGAACTTTCAGAAGTTGGAAAAACACGGATATGCCTCTGGCCCATGGGTGTCCCAAGCTTGGCCCCCGAGCTTAA 753 0.4489 MEAARRVMSRLRVVPLLMFSTGVVTASSPRSKTLPASNTNGLRLSSASSLGWGSKRVNKFPPIVKAGDPVLHEPAREVHLSEIKSEKVQNIIDDMIHVMRKAPGVGLAAPQIGIPFRIIVLEDKKEYISYNTEEEIKSQDRKPFDLLVILNPRLKKKSNKTAFFFEGCLSVDRYQAMVERYLDVEVAGFDRYGEPIKINASGWQARILQHECDHLDGTLYVDKMVPRTFRSWKNTDMPLAHGCPKLGPRA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02845 250 PANTHER PEPTIDE DEFORMYLASE 46 249 IPR023635 GO:0042586
Car01g02845 250 PANTHER PEPTIDE DEFORMYLASE 46 249 - -
Car01g02845 250 PRINTS Peptide deformylase signature 93 122 IPR023635 GO:0042586
Car01g02845 250 PRINTS Peptide deformylase signature 166 177 IPR023635 GO:0042586
Car01g02845 250 PRINTS Peptide deformylase signature 178 196 IPR023635 GO:0042586
Car01g02845 250 PRINTS Peptide deformylase signature 197 226 IPR023635 GO:0042586
Car01g02845 250 Gene3D Peptide deformylase 59 249 IPR036821 -
Car01g02845 250 TIGRFAM pept_deformyl: peptide deformylase 63 228 IPR023635 GO:0042586
Car01g02845 250 CDD Pep_deformylase 63 220 IPR023635 GO:0042586
Car01g02845 250 SUPERFAMILY Peptide deformylase 59 233 IPR036821 -
Car01g02845 250 Pfam Polypeptide deformylase 62 227 IPR023635 GO:0042586
Car01g02845 250 Hamap Peptide deformylase [def]. 59 235 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02845 Car-Chr1 53644932 53646925 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02845 K01462 - mnt:21384099 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02845 01 53644932 53646925 Car01g02845 01 53644932 53646925 ECH
Car01g02845 01 53644932 53646925 Car06g02360 06 25644467 25648174 PCT