Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02335 ATGTCTGCTGCTGTGTGCGGAAGTAAGAGATCTTTCTTTGAAGAACTTCCTCCTTCTCCGCCACTTTCAAAGAGGATTCGTTGTTCCTCTTCTAATTCTCCGATTCGTTTTCCGACTCCTTCTCTCTTCGATCAGCTTCGTAATCTTTTCCCTCACATGGACCATTTGGTTCTTGAGAGAGCTTTGCAAGAATGTGACAATGATCTAGATGCTGCCATCAAGAGCCTGAATGAGCTTTGCTTGGGAACTGCAGGTGGGAATTTTGGAACTGCCGAAGAATCACAGATTGATGTTAATGTGGATACAGGTAAATTGCAAGATGATGGGAATGCTTCTGCTTCTGAGAATCATACTACTTTGAACAACCTTCCTGCAGATGGAGCAGAATGGATTGAATTTTTTGTTCGAGAAATGATGGTTGCTACCAGTGTTGACGATGCTAGAGCCCGTGCTGCTAGAATGCTGGAGGTTCTAGAGAAGTCAATCAGTGAACGAGCTAGGGCTGAGGCAACAGATGCTCTTCAGAAGGAAAATTTGATGCTGAAAGAGCAGATTGAAGTGCTGATTAAGGAGAAAAATTCTTTCAAAAATGCATTTAGGATCCAACATGAACGTTTTTCTGATTATGAGAATAAGAATCAAGAATTGCAGAATTTGAAGCAGTTGGTGTCTCAATACCAGGAGCAGATCAGAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACGCATTTTCAGGGCATTTCCCACCAGATATCTTCTAA 789 0.4221 MSAAVCGSKRSFFEELPPSPPLSKRIRCSSSNSPIRFPTPSLFDQLRNLFPHMDHLVLERALQECDNDLDAAIKSLNELCLGTAGGNFGTAEESQIDVNVDTGKLQDDGNASASENHTTLNNLPADGAEWIEFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEVLIKEKNSFKNAFRIQHERFSDYENKNQELQNLKQLVSQYQEQIRTLEVNNYALAMHLKQAQQSNAFSGHFPPDIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02335 262 Pfam CUE domain 41 78 IPR003892 GO:0043130
Car06g02335 262 Coils Coil 209 236 - -
Car06g02335 262 Gene3D - 39 81 - -
Car06g02335 262 CDD CUE 41 76 - -
Car06g02335 262 ProSiteProfiles CUE domain profile. 38 83 IPR003892 GO:0043130
Car06g02335 262 SUPERFAMILY UBA-like 40 84 IPR009060 GO:0005515
Car06g02335 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Car06g02335 262 Coils Coil 171 191 - -
Car06g02335 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02335 Car-Chr6 25099095 25103103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02335 - - gmx:100813137 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02335 06 25099095 25103103 Car06g02335 06 25099095 25103103 ECH
Car01g02870 01 53827357 53829806 Car06g02335 06 25099095 25103103 PCT