Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02333 ATGCAGCAGAAAAGCGAACAAAACTCATCTCCCCAAAATGGTTGTCTGCAGGATGCTGCCAAACCATCCAAGAAAAGGCAAAGAGCTAATGGTATCTTATTTGATCAGGAGCGTTGCAACCATGACATTGCTAAAATGACAATTCTACATGATTATTCTCTTGATATTTTGAAACACCCGGGTTTCGTTGATTTCGTGCAGACTCTTTGTCCCCAGTTCAATCCATCATGTTTGAATTCCGTTGAAGGGTTTTGTGTTTCTATGTACCTCAGAGAGAAGCAAAATCTGTTAGATCTCATTAATAGGATTCCTGGACGACTCAACCTGACGTTGGACTTGTGGACTTCAAACCAGTCAACAGGGTATGTTTTTATTCGAGGACACTTCATTGATAGCGATTGCAACTTACATCATCCTATTCTCAATGTTGTTACAGTACCTTTTTGCGATTCCGATGATTCCCTAACCCAAGCCGTAATGACCTGCTTATCTGATTGGCATTTGGAGGGTCGGGTACTTACCCTTGCAGTCGATAAATCTTTCGCAAGTGAGAGTGTGAAGGTAAATTTGCAAGGCCATCTCTCTGTTAATAACCATGTGATTCTCAGTGGTCAGTTATTAAACCAGAATTGTTATGCCCGTGTTCTCAGTCGCCTTGCACTAGATGCACTACAAGCAATGGGAGAAACTATTAGCAAAGTTCGTAAGTGTGTGAAATTTGTGAAATTTTCTGAATCTCATGAAGAGAAGTTTATTGAGCTTAAACAACAACTTCAAGTACCTAGTTTGGTGAACCTTTTGATTGATGACCGATATAAATGGGATACAACATACCATATGCTCGTAGCTGTCTGTGAATTAAAGGAAGTCTTCGCTTGCTTTGATACCACTTGTCCCGATTTCACAATGACTCTAACTATGGACGACTGGAATCAGGTTGAAACTCTCCGCACATATTTGAAGTATTTGTATGATGCAGCTCAAGTTTTAACTGCCAGACCGCACCCAACTGCGAACTTATATTTTCACGAAGTCTCAAAACTTCATATGGAGTTGACCAATGCAGCCTTTGGTCATGATCCTTTTCTCAGTAGTTTGATTTTGCCTTTGCACAAGAATTTTGATCAGTATTGGACAGAAAGCTGTCTCATGTTGGCAGTTTCTGTAGCCGTGGACCCGAGGCATAAAATGAAACTTGTGGAATCCACCTTCGCTAAGATATTTGGAGATAATGCCGAACCATGGATAAGAATAGTTGAGGATGGCCTTCATGAACTATTCATTGATTATAACACTGATATGCTTCATTTTACGGCATCAATTGGCGATGAAGGGGATGATATTATGTCGAGGACAGAACCATATGAAGGGCCAGTTGATGGTTCTCTTTTTGTTGATGAAGGTGGAATTTCCGACTTTGAGTTTTTTATATCTGATTTTACTTGTATGCAGCAATTCAAGTCGGAATTGGATGAATATTTGGAAGAACCTCTTCTGTCCGATGTAAAAGAATTTGATATTCTGAGTTGGTGGAGAGTAAATCAACCGAAGTATCCAACACTATCTAGACTCGCATCTGATATTTTGTCAATGTCGATATCCACTGTGTCTGCAGATTCTGTTTTTGACACAGAAATTAGAAAAATGGATAACTACCGTAGTTCGTTAGACTCTCGTACTCTTGAAGCCCTTATTTGTGCCAAGGACTGGCTCCGATATAAATCTATACCTAAAAATGTTTCAAATACACTTGAGAAAATGAAACTTTAG 1770 0.3955 MQQKSEQNSSPQNGCLQDAAKPSKKRQRANGILFDQERCNHDIAKMTILHDYSLDILKHPGFVDFVQTLCPQFNPSCLNSVEGFCVSMYLREKQNLLDLINRIPGRLNLTLDLWTSNQSTGYVFIRGHFIDSDCNLHHPILNVVTVPFCDSDDSLTQAVMTCLSDWHLEGRVLTLAVDKSFASESVKVNLQGHLSVNNHVILSGQLLNQNCYARVLSRLALDALQAMGETISKVRKCVKFVKFSESHEEKFIELKQQLQVPSLVNLLIDDRYKWDTTYHMLVAVCELKEVFACFDTTCPDFTMTLTMDDWNQVETLRTYLKYLYDAAQVLTARPHPTANLYFHEVSKLHMELTNAAFGHDPFLSSLILPLHKNFDQYWTESCLMLAVSVAVDPRHKMKLVESTFAKIFGDNAEPWIRIVEDGLHELFIDYNTDMLHFTASIGDEGDDIMSRTEPYEGPVDGSLFVDEGGISDFEFFISDFTCMQQFKSELDEYLEEPLLSDVKEFDILSWWRVNQPKYPTLSRLASDILSMSISTVSADSVFDTEIRKMDNYRSSLDSRTLEALICAKDWLRYKSIPKNVSNTLEKMKL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02333 589 SUPERFAMILY Ribonuclease H-like 101 573 IPR012337 -
Car06g02333 589 Pfam Domain of unknown function (DUF4413) 334 430 IPR025525 GO:0003677
Car06g02333 589 MobiDBLite consensus disorder prediction 1 27 - -
Car06g02333 589 PANTHER BED FINGER-RELATED 7 579 IPR045259 -
Car06g02333 589 Pfam hAT family C-terminal dimerisation region 489 571 IPR008906 GO:0046983
Car06g02333 589 MobiDBLite consensus disorder prediction 1 17 - -
Car06g02333 589 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 7 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02333 Car-Chr6 25060625 25064119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02333 - - gmx:106799409 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02333 06 25060625 25064119 Car06g02333 06 25060625 25064119 ECH
Car01g02875 01 53851487 53856209 Car06g02333 06 25060625 25064119 PCT