Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01459 ATGGCGGTGGAGTATAGTTGCTGCGAATCGGGGTTCTTCATCCACATATTCATAATTGTGTTTCTGGTTGTGTTCGCCGGATTGATGTCGGGCCTCACCTTGGGCCTCATGTCTTTGAGCCTTGTTGATCTTGAAGTTCTTGCTAAGTCTGGTACTCCTCACGATCGTAAACATGCCGAGAGGATATTGCCTGTTGTCAGAAATCAGCATTTATTGCTTTGCACCCTGCTAATTTGTAATGCCGCTGCCATGGAGGCACTTCCTATTTTTCTTGATAGTCTTGTTACTGCCTGGGGTGCTATCCTGATTTCGGTCACATTGATTCTTCTCTTCGGTGAGATTATACCCCAATCAGTTTGTTCTCGATATGGTTTAGCTATTGGTGCATCAGTGACTCCTTTTGTCCGTGTGCTTGTGTGGATATGTTATCCAGTTGCTTTTCCAATTAGCAAGTTATTGGACTATTTGTTGGGTCATCGACATGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACACTCGTAGATTTGCATGGTAACGAGGCTGGAAAAGGTGGGGAACTGACACATGATGAAACAACAATAATTGCCGGGGCACTTGAACTCAGTGAGAAGACAGCCAGTGATGCCATGACTCCTATATCTGAAACATTCGCAGTTGACATTAACTCAAAGCTTAATAGGGAACTGATGAATGAAATATTAGAAAAAGGGCATAGCAGAGTCCCAGTCTATTATGAGCAGCCCACAAACATTATTGGACTTATACTGATCAAGAATTTGTTGACAATTCATCCAGAAGACGAAGCACCTGTAAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATGCCACTTTATGACATTTTGAATGAGTTTCAGAAGGGCCACAGTCACATGGCCGTTGTTGTAAGACAGTGTGACAAGACCAAGCAACTATCTTCCAAAAATTATGCAAATGATTCTGTGAGAGATGTGAAGGTAGATATTGATGGTGAAAAGCTTCCCCACGAGAAAGTCTTGAAACCCAAGATACCAATCCAAAAGTGGAAAAGCTTTCCAAATACAAACAAGTCAAATAGGGGCGGTACTCGGAGCAGGAAATGGTCAAAAAATATGTACTCGGATATTTTAGAGATAGATGGTAGCCCCCTTCCAAATATTCCTGAAGAAGAAGAAGCTGTTGGAATAATTACAATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACAGATCATCATTTTGAAGACTCATAA 1278 0.4202 MAVEYSCCESGFFIHIFIIVFLVVFAGLMSGLTLGLMSLSLVDLEVLAKSGTPHDRKHAERILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKLLDYLLGHRHEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETFAVDINSKLNRELMNEILEKGHSRVPVYYEQPTNIIGLILIKNLLTIHPEDEAPVKSVTIRRIPRVPESMPLYDILNEFQKGHSHMAVVVRQCDKTKQLSSKNYANDSVRDVKVDIDGEKLPHEKVLKPKIPIQKWKSFPNTNKSNRGGTRSRKWSKNMYSDILEIDGSPLPNIPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01459 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Car06g01459 425 Gene3D - 380 417 IPR046342 -
Car06g01459 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Car06g01459 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Car06g01459 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Car06g01459 425 Gene3D - 191 323 IPR046342 -
Car06g01459 425 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Car06g01459 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
Car06g01459 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01459 Car-Chr6 14087266 14092622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01459 K16302 - gmx:100801937 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01459 06 14087266 14092622 Car06g01459 06 14087266 14092622 ECH
Car06g01459 06 14087266 14092622 Car01g00206 01 1580691 1582501 PCT