Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00206 ATGGCGGTTGAGTATAAGTGTTGTGAAACAGAGTTTTTCATAAGAATTGTGATAATTGTGTTGCTTGTTGTGTTTGCTGGATTGATGTCAGGGCTCACCTTAGGTCTTATGTCTTTGAGCCTTGTTGATCTTGAGGTTCTTGCTAAGTCTGGTACCCCTCAGGATCGAAAACATGCTGAGAAAATATTGCCTGTTGTAAGAAATCAACATCTATTGCTTTGTACCCTTCTAATATGCAATGCTGCAGCCATGGAGGCACTTCCAATTTTTCTTGATAGTCTTGTTGTTGCTTGGGGTGCTGTCCTGATTTCAGTTACATTAATTCTTCTCTTTGGTGAGATTATTCCTCAATCAGTTTGTTCTCGGCATGGTTTAGCAATTGGTGCAAAAGTGGCTCCAATTGTTCGTGTTCTTGTATGGATATGTTTTCCTGTTACTTATCCAATTAGCAAGCTGTTGGATTTTTTGCTGGGGCATAGACATGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACACTTGTAAATTTGCATGGTAATGAGGCTGGGAAAGGTGGTGAACTAACACATGATGAAACAACTATCATTGCTGGTGCACTTGAACTCACTGAGAAGATAGCTGATCAAGAATTTGTTAACTACTGA 642 0.4003 MAVEYKCCETEFFIRIVIIVLLVVFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAEKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVVAWGAVLISVTLILLFGEIIPQSVCSRHGLAIGAKVAPIVRVLVWICFPVTYPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKIADQEFVNY 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00206 213 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Car01g00206 213 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 208 - -
Car01g00206 213 Pfam Cyclin M transmembrane N-terminal domain 18 190 IPR002550 -
Car01g00206 213 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 208 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00206 Car-Chr1 1580691 1582501 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00206 K16302 - gmx:100795897 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00206 01 1580691 1582501 Car01g00206 01 1580691 1582501 ECH
Car06g01459 06 14087266 14092622 Car01g00206 01 1580691 1582501 PCT