Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01109 ATGCCTGGTTTTGTTGCTGGCAAGAAAAGATTTTCAGAGACAAAATTTTCCAATTTGGTTAATGAAGATAAGTCAACTCTTTTGAAAGACCATCATAAGGTTGTAGATGATAGCCCTATTCTTCCTGGGCTACTTGATGATGTTTCAAAGTATTGTCTTGCGCTGGTGCCTCGTTCGGACTCACCAGCTATGGGTAGTGTCTGTAAGAGATGGAGGCAATTTATTCAAGGTGAAGAATTCATAACGGTACGAAAATTGGCTAGGCAGGTTGAGGAATGGCTGTATATCTTAATAGCAGATAGTAAAGGAAAAGGAAGTCATTGGGAAGTTATGGATTGTTTTGGTCATAATCGTCGATCGCTTCCACTAATGCCTGGTCCTGTGAAGGCTGAGTTTGGTGTTGTTGTTCTTAATGGAAAACTTCTTGTTATGGGTGGATATTCATCAATTGATGGAACTGCTTCTGTCTCACCAGATGTTTACCAATATAATTCTTGCCTCAACAGCTGGAGCAGATTGTCAAACATGAACGTGTCTCGGTACGACTTTGCTTGTGCAGAAGTCAATGGCTTGGTTTATGCAGTTGGAGGATATGGAGAAGCAGGCGACAGTCTCTCCAGCGCCGAGGTGTATGATCCGGATACTAATAAGTGGACGCTGATTGAGAGCATTCGTCGCCCCAGATGGGGTTGCTTTGCCTGTGGATTTGAGGGGAAACTCTATGTAATGGGTGGAAGGTCAAGCTTTACAATTGGAAATTCTAAGTTTGTTGATGTTTACAACCCTGAAAAGCATAAATGGTGTGAGATGAAAAATGGGTGTGTCATGGTTACTGCTCATGCAGTACTGGAAAATAAGTTGTTCTGTATGGAGTGGAAGAATCAACGGAAGTTATCCATATTTGATCCACAGAATAATTCATGGAAAATGGTACCAGTACCTTTGACAGGTAGTTCAAGTGTTGGTTTTAGATTTGGGATATTGAATGGTAAGCTTTTGCTGTTTTCAATGAAGGAAGATCCTACATATAGGACTTTGTTGTATGATCCGAATGCTGCGGTGGGGTCGGAGTGGGAGACTATTGATATAAGACCATCTGGTTTATGTTTGTGCAGTGTAACAACCAAGGCTTGA 1134 0.4153 MPGFVAGKKRFSETKFSNLVNEDKSTLLKDHHKVVDDSPILPGLLDDVSKYCLALVPRSDSPAMGSVCKRWRQFIQGEEFITVRKLARQVEEWLYILIADSKGKGSHWEVMDCFGHNRRSLPLMPGPVKAEFGVVVLNGKLLVMGGYSSIDGTASVSPDVYQYNSCLNSWSRLSNMNVSRYDFACAEVNGLVYAVGGYGEAGDSLSSAEVYDPDTNKWTLIESIRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDVYNPEKHKWCEMKNGCVMVTAHAVLENKLFCMEWKNQRKLSIFDPQNNSWKMVPVPLTGSSSVGFRFGILNGKLLLFSMKEDPTYRTLLYDPNAAVGSEWETIDIRPSGLCLCSVTTKA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01109 377 PANTHER OS02G0202900 PROTEIN 1 377 IPR045887 -
Car06g01109 377 PANTHER KELCH REPEAT F-BOX PROTEIN 1 377 - -
Car06g01109 377 SMART kelc_smart 191 238 IPR006652 GO:0005515
Car06g01109 377 SMART kelc_smart 140 190 IPR006652 GO:0005515
Car06g01109 377 SMART kelc_smart 239 287 IPR006652 GO:0005515
Car06g01109 377 Pfam Kelch motif 131 177 IPR006652 GO:0005515
Car06g01109 377 Pfam Kelch motif 179 221 IPR006652 GO:0005515
Car06g01109 377 Gene3D - 79 376 IPR015915 GO:0005515
Car06g01109 377 SUPERFAMILY Kelch motif 91 369 IPR015915 GO:0005515
Car06g01109 377 Pfam Kelch motif 228 272 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01109 Car-Chr6 10760239 10761466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01109 44 222 Miscellaneous Gene Families AT4G33900 26.289 3.51e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01109 - - gmx:100815474 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02029 05 65553663 65555028 Car06g01109 06 10760239 10761466 PCT