Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01100 ATGTCGAGTTTCTATTGTTACGCAAAGCATAACTCAGGTCCTTTGAGATCTGCTCTTGTAACCGTTGAAGGTACTGTCACTACCGTTCTTGCTCCTTTTTACAACAAATTCAAGGATCTCCCTCAACATCTCCTTCTTTTTCTCGACAACAAGGTTGATGAAGTTACCAACAAATTCGATGAACATGCTCCTCCTCTTGCGAAGCAAGTAGCAAACCAAGCTAAAGGTTTGATTGAAGAAGTGACACACAAAGCTGAGAAAGTTGTGAGTGAGGCTCAATCAGGTGGACCAAGAGCTGCTGTAAATTATGTTGCTACAGAGTCTAAACAAATTGTGCTAACAGGGTCAGTAAAATTATGGTCTGGTCTCAACCATTATCCATTATTTCATGCAGTGGCAGAGATGGCTGTTCCAACAGCTGCACATTGGTCAGAAAAGTATAACCATGTTGTTAAGGATATTACTGGAAAGGGTTATGCTGTGTTTGGTTATTTGCCTTTGATTCCTGTTGATGATATAGCTAAGGCATTTAAACAAGGTGAAGCTAAGGTGCGTGCAGGTGAAAAAATTTCAGTGGAAGATGTTTCTGACTGA 594 0.4057 MSSFYCYAKHNSGPLRSALVTVEGTVTTVLAPFYNKFKDLPQHLLLFLDNKVDEVTNKFDEHAPPLAKQVANQAKGLIEEVTHKAEKVVSEAQSGGPRAAVNYVATESKQIVLTGSVKLWSGLNHYPLFHAVAEMAVPTAAHWSEKYNHVVKDITGKGYAVFGYLPLIPVDDIAKAFKQGEAKVRAGEKISVEDVSD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01100 197 Pfam Rubber elongation factor protein (REF) 2 179 IPR008802 -
Car06g01100 197 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 194 - -
Car06g01100 197 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 194 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01100 Car-Chr6 10677475 10679501 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01100 - - gmx:100500275 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02016 05 65463371 65466115 Car06g01100 06 10677475 10679501 PCT