Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02016 ATGGCCACCAACGAGATAGAGGTTAAGGAAGAGAACCAGAACAAAGAACTAAAGCGCCTAGGGTTTGTGAAGATCGCTGCTATTCAAACTTATGTGTTTGTTTCATATCTGTATGAATCCGCTAAGAAAAACTCAGGACCTTTGAGATCTGCTGTTGAAACGGTGGAGGGAACAGTTACCACCGTTATTGGTCCTGTATACGACAAATTTAAGGGTGTCCCCGATGATGTCCTTGTTTTTGTGGACAACAAGGTGGATGAAGCTACGCACAAGTTCAATGAGCATGCTCCTCCTTTTGCTAAGCAGCTTGCAGATCAATCCAAAAGTTTGATTCAGAAAGTGACAAATGAAGCGGGGAAAGTTGTGAGTAAGGGTCGATCTGGAGGACCACGAGCAGCTGTAGATTATGTTGCTATAGAGTCCAAAAATTTGCTACTAATCAATTCAGTGAAGATCTGGCATGTGCTCAACCAATTTCCACCATTCCATGCAGTGGCAGAGATGGCAACTCCCACTGCTGCTCACTGGTCTGAGAAATACAACCATGTAATCAAGGCTATGGCTGAAAAGGGCTATAGTTTTGTTGGGTATCTACCTTTCATTCCTATTGATGATATATCTAAGGCATTTAAGCAGGGGGAAGCTAAGTTGAAAGGAAATGGAGTGGTCTCTGGGGGAAAGAAAACAGAATAA 693 0.43 MATNEIEVKEENQNKELKRLGFVKIAAIQTYVFVSYLYESAKKNSGPLRSAVETVEGTVTTVIGPVYDKFKGVPDDVLVFVDNKVDEATHKFNEHAPPFAKQLADQSKSLIQKVTNEAGKVVSKGRSGGPRAAVDYVAIESKNLLLINSVKIWHVLNQFPPFHAVAEMATPTAAHWSEKYNHVIKAMAEKGYSFVGYLPFIPIDDISKAFKQGEAKLKGNGVVSGGKKTE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02016 230 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Car05g02016 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 226 IPR008802 -
Car05g02016 230 PANTHER RUBBER ELONGATION FACTOR-RELATED 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02016 Car-Chr5 65463371 65466115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02016 - - mtr:MTR_3g085370 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02016 05 65463371 65466115 Car06g01100 06 10677475 10679501 PCT