Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01098 ATGAGAACTAGGAGAGGGGCTTGTTATCCAGAACCTGGAATAGTAACAACGGTATGTTCCGTTGCAAAGAGAAAGAAGGATGTGCTAATACTCGCGCATATGCCTAAAGAGTATAATTTTTGTCCAAAGAAGCAGAAGAAATGTTCCGAGAAAACGGTTACGGAATACGATTATTTCGATACTTTGCCCGACGACCTTGTTATTTCTATCTTCTGCAAGCTTAGCTTCACAGCCACTTCCCCTTCCGATTTTGTCAGCGTTTTCATAACGTGTAAAAGATTAAAAAGATTAGCACTCCATTCTCTTGTGTTATCCAAAGCGTCTCCGAGAACTTTCTCCATTAAAGCCAAAAACTGGTCCGAATCTGCACAACGATTTCTCAAACAGTGTGCAGAGGCAGGGAATGTTGAAGCCTGTTATACTTTAGGCATGATTCGATTTTACTGTTTACAAAACAAAGGGAGCGGTGCTTCGCTTATGGCAAAAGCTGCGATGAACTCTCACGCGCGTGCTCTCTACTCGCTTGCGGTTATACAGTTCAACGGCAGCGGCGGTACAAAAAGTGACAAAGACCTCCGTGCCGGAGTTGCTCTTTGCGCCAGAGCCGCTTTTCTCGGCCACATCGACGCGCTGCGTGAGCTTGGACACTGTTTACAGGACGGTTACGGTGTTAAGCAGAACATCGCCGAGGGGAGGCGTTTTCTCATCCAGGCGAACGCACGTGAACTTGCCGCCGTATTATCAACCGGCGCCGCCGCACATCATTTTGTATCAAAAAACGTTCAATCGCAACTCCGACACGTCGTGGCGTCCGGATGTCCGCTTCTGAGCGATTTTGGATGTAACGTGCCGGCGCCGGAGCCACATCCGGCCAGCCGGTTCATGGCGCAGTGGTTTGCGATTCGAGGCGGTTCACCTGGTTCTGGTTTAAGGCTCTGTTCGCATGTAGGTTGTGGACGGCCGGAGACGCGGAAGCATGAGTTTCGACGGTGTTCGGTGTGTGGCGCGGTGAATTATTGCTCACGCGCGTGTCAAGCACTTGATTGGAAGTTCCGCCATAAGGTGGAATGCGCACCTGTGGAGCGATGGCATGACGAAGATGATGAAGACGCCGGAGAAGATGACGGCGACCGTGAGGTAATGGTTATGGAGGATAGTTAG 1161 0.5004 MRTRRGACYPEPGIVTTVCSVAKRKKDVLILAHMPKEYNFCPKKQKKCSEKTVTEYDYFDTLPDDLVISIFCKLSFTATSPSDFVSVFITCKRLKRLALHSLVLSKASPRTFSIKAKNWSESAQRFLKQCAEAGNVEACYTLGMIRFYCLQNKGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNIAEGRRFLIQANARELAAVLSTGAAAHHFVSKNVQSQLRHVVASGCPLLSDFGCNVPAPEPHPASRFMAQWFAIRGGSPGSGLRLCSHVGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWHDEDDEDAGEDDGDREVMVMEDS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01098 386 SUPERFAMILY F-box domain 51 115 IPR036047 GO:0005515
Car06g01098 386 Gene3D Tetratricopeptide repeat domain 111 264 IPR011990 GO:0005515
Car06g01098 386 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 41 384 - -
Car06g01098 386 SUPERFAMILY HIT/MYND zinc finger-like 312 362 - -
Car06g01098 386 PANTHER MYND DOMAIN-CONTAINING 41 384 IPR044508 -
Car06g01098 386 SMART sel1 208 243 IPR006597 -
Car06g01098 386 SMART sel1 169 207 IPR006597 -
Car06g01098 386 SMART sel1 136 168 IPR006597 -
Car06g01098 386 Gene3D - 308 361 - -
Car06g01098 386 MobiDBLite consensus disorder prediction 365 386 - -
Car06g01098 386 Pfam MYND finger 318 357 IPR002893 -
Car06g01098 386 ProSiteProfiles Zinc finger MYND-type profile. 315 357 IPR002893 -
Car06g01098 386 SUPERFAMILY HCP-like 118 239 - -
Car06g01098 386 MobiDBLite consensus disorder prediction 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01098 Car-Chr6 10656886 10658760 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01098 - - gmx:100798174 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02015 05 65456695 65458129 Car06g01098 06 10656886 10658760 PCT