Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02015 ATGCGAACTAGGACAGGTTTGTGTTATCCTCAAAACATGTCTTCTAACTCTTTTCTTAGCCGGAAAAAGCAGAaaacaatgccggaaaaaccacccggagtttctgacttgtttgaatctcttcccGATGACCTTGTCCTCTCTATCCTCGGAAAGCTTAGCTCCACCGCAAATTCTCCCTCTGATTTCATCACTGTTTTAATCACGTGCAAAAGACTCAAATCTTTAGGTCTTAGCTCTATTGTTTTGTCGAAAGCATCCAACAAAACATTATCAGTTAAAGCTAAAAATTGGTGTGACTCTGCTCATCGATTTCTCAAACGATGTGTTGATGCTGGAAACACTGAAGCGTGTTACACTCTCGGAATGAACGTTATTGAAGGACGGCGGTTTTTAGTTCAAGCTAACGCCCGTGAACTAGCTGCCGTTTTGTCTAACGGGAACAGTAAACAGCCGTTGCTTACGTGGAGCATTAACCCGAACCAGCCACCTCAACCTCAGGTTCGGGCTATTGCTGGTTCGGGTTGTCCGTTGCTAAGTGATTTTGGATGTAACGTTCCGGCTCCAGAGGCTCACCCGGCTAGTAAGTTTATGACTGAGTGGTTTGCTATTCGAGGCGGGTTTCCGGGTTCGGGTATGAGGTTATGTTCGCATTCGGGTTGCGGGCGACCCGAGACAAGGAAGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGCGGTTAATTATTGTTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGACATAAGGTGGAGTGTGCGCCCGTAGAGAGGTGGTTAGATGAGGAGGTTAACGGCGCCGGTGAGGTTAACGGCGCCGTTAACGTTGAAGAGGTTGTTGTGGTTAATAGATAG 876 0.4441 MRTRTGLCYPQNMSSNSFLSRKKQKTMPEKPPGVSDLFESLPDDLVLSILGKLSSTANSPSDFITVLITCKRLKSLGLSSIVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNTEACYTLGMNVIEGRRFLVQANARELAAVLSNGNSKQPLLTWSINPNQPPQPQVRAIAGSGCPLLSDFGCNVPAPEAHPASKFMTEWFAIRGGFPGSGMRLCSHSGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKVECAPVERWLDEEVNGAGEVNGAVNVEEVVVVNR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02015 291 Pfam MYND finger 221 260 IPR002893 -
Car05g02015 291 SUPERFAMILY F-box domain 28 82 IPR036047 GO:0005515
Car05g02015 291 ProSiteProfiles Zinc finger MYND-type profile. 218 260 IPR002893 -
Car05g02015 291 PANTHER MYND DOMAIN-CONTAINING 20 123 IPR044508 -
Car05g02015 291 PANTHER MYND DOMAIN-CONTAINING 124 290 IPR044508 -
Car05g02015 291 Gene3D - 209 265 - -
Car05g02015 291 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 20 123 - -
Car05g02015 291 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 124 290 - -
Car05g02015 291 SUPERFAMILY HIT/MYND zinc finger-like 215 265 - -
Car05g02015 291 MobiDBLite consensus disorder prediction 12 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02015 Car-Chr5 65456695 65458129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02015 - - cam:101504279 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02015 05 65456695 65458129 Car06g01098 06 10656886 10658760 PCT