Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01082 ATGGAGGTGGAAGAGTGTATTGCGATGGTGGCATTGGAATCTCTAGGTAAAGGTTTTGATTTGGCTAGTGATTTTCGTTTAAGGTTTGCTAAGGGAATTCGTGGGGGTGCTAATAGTAATAGTAGTAAGAGGTTAGTGGTGCTTGATGAAAACAATAAAAGGGATATTTTTATTCCTGGAGTTGGAGGAACCACTAAAATTGAAGGGGTTTCTGAGAATATTCGTTGTGATAAAGGCGATCGAATTCGCTTCAAGTCTGATGTACTTGAATTCAACCAGATGTCTGAGTTGCTAAATCAAAAATCAGCAGTACAAGGAAAAATCCCTTCTGGATATTTTAATGCTCTTTTTGATATGAGTGGTGATTGGCTTCGTGACGCTACTGACATCAAATATCTTGCTTTTGATGGGTATTTTATTTCTCTCTACTATCTGCACCTCACAGCTTCTCCACTTGTACTGCAAGAGGAAGTAAAAAAGTCTGTTCCAGCTCAGTGGGATCCAGCTTCACTGTCTAGGTTCATCCAGACATATGGTACTCACATAGTAGTAGGTATGTCTGTTGGAGGTCAAGATGTAATTTGTGTCAAACAAAAACATTCATCAAAGATTCCCCCCGGTGATATCAGGAGACATTTAGAGGATCTTGGAGATTTTATATTTTCGGATGTAAGAAGCCCTTCTTCACTACAGAAGAAGACGGCAGATAGTAAACAGAAGGTCCCTGAGGTCTTTAATCGTGTGATGCAATCAAACACAATGCAGTTTACCAGTATTTCAGAAACATCAAGCAAGGACGGCCTCACTATTATTTGCTCCAAAAGAGGAGGAGATGTATACAAGCACAGTCACTCAAATTGGCTACAGACAGTGCCTTCTAATCCCGAAGCGATCTTATTCAAGTTTGTTCCTATTTCCTCACTTCTGACTGGAATTCCTGGAAGTGGCTATCTTAGTCATGCAATCAATTTATATTTGCGCTATAAGCCTTCTCCTGAAGATTTGCAATATTTTTTAGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTGTGAACTGCCTCTCAGGCATCAGCGAAGAAAGACCTCTTCCCTTTCCCTGCAATTCTGTTTCTTTGGTCCAAAGCTTCATATTAGCTCTACTCAGGTGGTAAGTGATCAAAAACCCGTGGTTGGCCTCCGCATGTACTTGGAGGGCAAGAAAAGTGACAGACTTGCTTTACATATAAATCATCTTTCGAGCCTCCCAAACAAGATGATCCTCTCTTCAGGTACCCCAACCTCGAGCATACCATCTATGTGGCGAGGATCCGATGAAAATGAATCCGGTGACCAATTTCTAGAACCAATCAGATGGAACAGATTCTCAAACGTGTGTACAGCCGTGGTCAAGCATGACCCTAACTGGCTGAACGATTGTGGAGGTGTTTACATTGTAACTGGTGCACAACTCATTGCCAAAGGGAGTTGGCCGAGAAATGTGCTCCATCTGCGTCTTCTCTTTACTCATATAACCAACTGCAGTATACGGAAGTCAGAGTGGGGTGCCGCGCCAGAGACTTCAAGAAAATCGTCTTTCCTCACAAATTTAAGCACAACATTTTCATTCACACAGCAAAGTACTATTGCTCCACCAAAGCAGGCCCCAACCATACTTAACTCTGGCATTTATCCAAATGGTCCACCTTGTCCTGTTCGCGCCGGTAAACTACTTAAATATGTAGAGACAGCTGAGGTTTTGCGAGGCCCTCATGATGCTCCTGGTCATTGGTTGGTTACAGCTGCTAAGCTTGTGACTGAGGGTGGTAAGATAGGATTGCAGGTAAAGTTTGCATTGTTAGATTATTGGTGA 1854 0.4234 MEVEECIAMVALESLGKGFDLASDFRLRFAKGIRGGANSNSSKRLVVLDENNKRDIFIPGVGGTTKIEGVSENIRCDKGDRIRFKSDVLEFNQMSELLNQKSAVQGKIPSGYFNALFDMSGDWLRDATDIKYLAFDGYFISLYYLHLTASPLVLQEEVKKSVPAQWDPASLSRFIQTYGTHIVVGMSVGGQDVICVKQKHSSKIPPGDIRRHLEDLGDFIFSDVRSPSSLQKKTADSKQKVPEVFNRVMQSNTMQFTSISETSSKDGLTIICSKRGGDVYKHSHSNWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPEDLQYFLEFQIPRQWAPMFCELPLRHQRRKTSSLSLQFCFFGPKLHISSTQVVSDQKPVVGLRMYLEGKKSDRLALHINHLSSLPNKMILSSGTPTSSIPSMWRGSDENESGDQFLEPIRWNRFSNVCTAVVKHDPNWLNDCGGVYIVTGAQLIAKGSWPRNVLHLRLLFTHITNCSIRKSEWGAAPETSRKSSFLTNLSTTFSFTQQSTIAPPKQAPTILNSGIYPNGPPCPVRAGKLLKYVETAEVLRGPHDAPGHWLVTAAKLVTEGGKIGLQVKFALLDYW 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01082 617 Pfam MAC/Perforin domain 113 325 IPR020864 -
Car06g01082 617 PANTHER OS02G0475300 PROTEIN 5 616 - -
Car06g01082 617 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 339 IPR020864 -
Car06g01082 617 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 616 IPR044663 GO:0006952|GO:0012501|GO:2000031
Car06g01082 617 SMART MACPF_8 130 327 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01082 Car-Chr6 10462274 10467307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01082 - - gmx:100787945 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01996 05 65283074 65287142 Car06g01082 06 10462274 10467307 PCT