Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01996 ATGGAAGATGAGGGTGGTAGTTTGTTGATGTTTCCAATGGAGAAGAGTGCGTTGGAGTGTTTGGGTAAAGGTTTTGATCTAACTAGTGATTTTCGAATGAAATTTTCTAAAGGAATAACTAATGGTGGGAGATTAGTGGTCGTTGATGAAGTTAACAAAAGGGATATTATGATTCCAGGTGGAGCTACAATTCCTGATATTTCTGAAGATATTCGATGTGACAAAGGTGATCGTGTTCGCTTCAAGTCTGATGTTCTTCAATTCAACCAGATGTCTGAGTTGCTTAATCAGAAATCAGGCATACAAGGAAAAATTCCATCAGGCTATTTTAATGCTATGTTTGATTTAAGTGGTGATTGGTTTCGTGATGCTCAAGACATCAAATCTCTTGCTTTTGATGGTTACTTCATTTCCCTTTACTATTTGCACTTAACTGCTTCACACCTTGTACTGCAAGACGAAGTTAAAAAGTCTGTTCCACCAAACTGGGATCCAGCTTCGTTAGCAAGGTTTATTGTGGCATATGGTACACACATAATAGTAGGTATGGCTGTTGGAGGTCAAGATGTTATTTGTGTCAAACAAAAACATACTTCAAAGGTTCCTCCTGGTGATCTCAGAAGACATTTAGAGGATTTAGGAGATTTTTTATTTTCAGATTTAAGAAGCCCTTCACTACTACAGAGAAAGACAACAATAGAAACCAAACAAAAAGTTCCTGAAGTTTTTAATCGTGTAATGCAATCAACCACAATGCAGTTCACAAGTATTTCAGAATCTTCAACCAAAGATGGTCTCACCATTATTTCTTCAAAAAGAGGAGGAGATGTGTTTAAGCACAGTCACTCAAGTTGGCTCCAAACAATGGCTTCTAATCCTGAAGCAATCCACTTCAAGTTTGTTCCTATTTCATCACTTCTCACAGGAATTCCAGGAAGTGGCTATCTTAGTCATGCAATCAATTTGTATTTACGATATAAGCCCTCTCCAGAAGACTTGCAATACTTCTTGGAGTTCCAAATTCCCAGGGAATGGGCACCCATGTTTTCTGAGCTGCCTCTGAGGCATCAACGGAAAAAGACTTATTCTCCTCCCCTGCAATTTAGTTTTATGTCTCCAAAGCTTCATGTCAACTCTAAAAAGGTAGTAAGTGAACAAAAACCTGTGGTTGGCCTCAGGTTATACTTGGAGGGAAGGAAATGTGATAAACTTGCAGTACACATACATCATCTTTCAAGCCTCCCAAATACAATGACCCTCTCTTCAGATACCACAACCTCAGCTATGTGGCGAGGATCTGACGATGATGAATCCAGTGACAACTTTGCAGAACCAATAAGATGGAAGCGATTCGCACACGTGTGCACCTCAGTGGTTAAGTATAACCCTAACTGGTTGCAAGAATCAAATTCAAGTGGTGTTTATATTGTAACCGGTGCACAACTCATTAGCAAAGGGAATTGGCCGAGGAATGTGCTTCATTTGTGCCTTCTCTTCACTCACATACCCAATTGCAGCATCAGGAGAACAGAATGGGCTGCTGCACCAGAGGCTTCAAGAAAATCAACTTTCTTCACGAATCTAAGCACAACATTTTCATTCACACAACAAAGTGTTACTGCTACACAGAAGCAGGCTCAGCAGCAGGCTCCAACAGCACTTAACTCTGGTGTTTATCCAAATGGGCCACCAGTGCCTGTTCGTTCAGCTAAAATGCTTAAATATGTGGAGACAAACGAGGTTGTGAGGGGACCACATGATGCTCCTGGGCATTGGTTGGTTATTGCTGCTAAGCTTGTCACAGAAGGTGGTAAAATTGGATTACAGGTAAAGTTTGCATTGTTAGATTACTAG 1854 0.404 MEDEGGSLLMFPMEKSALECLGKGFDLTSDFRMKFSKGITNGGRLVVVDEVNKRDIMIPGGATIPDISEDIRCDKGDRVRFKSDVLQFNQMSELLNQKSGIQGKIPSGYFNAMFDLSGDWFRDAQDIKSLAFDGYFISLYYLHLTASHLVLQDEVKKSVPPNWDPASLARFIVAYGTHIIVGMAVGGQDVICVKQKHTSKVPPGDLRRHLEDLGDFLFSDLRSPSLLQRKTTIETKQKVPEVFNRVMQSTTMQFTSISESSTKDGLTIISSKRGGDVFKHSHSSWLQTMASNPEAIHFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSPEDLQYFLEFQIPREWAPMFSELPLRHQRKKTYSPPLQFSFMSPKLHVNSKKVVSEQKPVVGLRLYLEGRKCDKLAVHIHHLSSLPNTMTLSSDTTTSAMWRGSDDDESSDNFAEPIRWKRFAHVCTSVVKYNPNWLQESNSSGVYIVTGAQLISKGNWPRNVLHLCLLFTHIPNCSIRRTEWAAAPEASRKSTFFTNLSTTFSFTQQSVTATQKQAQQQAPTALNSGVYPNGPPVPVRSAKMLKYVETNEVVRGPHDAPGHWLVIAAKLVTEGGKIGLQVKFALLDY 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01996 617 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 12 617 IPR044663 GO:0006952|GO:0012501|GO:2000031
Car05g01996 617 PANTHER OS02G0475300 PROTEIN 12 617 - -
Car05g01996 617 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 4 337 IPR020864 -
Car05g01996 617 Pfam MAC/Perforin domain 110 323 IPR020864 -
Car05g01996 617 SMART MACPF_8 127 325 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01996 Car-Chr5 65283074 65287142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01996 - - gmx:100781070 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01996 05 65283074 65287142 Car06g01082 06 10462274 10467307 PCT