Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00867 ATGTTGAGAATCACAAAGCGCAATATGGAGCATAAGAATTGTGATTTCCAACTAGCAGTGTTCATCATCTTCCCATGCCTCGGTTTAATCCTAACCTTCAACTACTTCATCTCATTCATCACATGGATCTTCAAGATGTGCCTCCGATCTGAAAAGCACCTCATCAAATCCTACGGTTCATGGGCTATAATCACCGGAGCAACCGATGGCATCGGAAAAGCCTTCGCTTACCAACTAGCACACAGAAATCTCAACCTAATTATCGTCAGTAGAAATTCAAAGAAACTCGAAACAGTTGAAAACGAAATCAAAACAAAATACCCTCACGTTCAGATTAAAACCATCACTGTGGATTTTTCCGGCGACATTACGGTGGGTCTCCGGGAAATAGAAGTTTTGGGACGTGATTTGGATGTTGGAATTTTGATTAACAATGTGGGAATTACTTATCCTAAGGCTATGTTCTTTCATGAAGTGAAGGAGGAAATGTGGATGAAGATTGTTAGTGTGAACATTGAAAGTATGATGAGAGTAACGAAAGGTGTTTTGTGTGGGATGATGGAAAGGAAGAAGGGTATGATTGTAAATGTTGGGTCTGGTGCAGGGGTACTAGTGCCTTCACATCCTCTGTTTACAATCTATGCTGCAACTAAAGCGTAA 660 0.4076 MLRITKRNMEHKNCDFQLAVFIIFPCLGLILTFNYFISFITWIFKMCLRSEKHLIKSYGSWAIITGATDGIGKAFAYQLAHRNLNLIIVSRNSKKLETVENEIKTKYPHVQIKTITVDFSGDITVGLREIEVLGRDLDVGILINNVGITYPKAMFFHEVKEEMWMKIVSVNIESMMRVTKGVLCGMMERKKGMIVNVGSGAGVLVPSHPLFTIYAATKA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00867 219 PANTHER RH59310P 21 219 - -
Car06g00867 219 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 148 IPR002347 -
Car06g00867 219 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 192 200 IPR002347 -
Car06g00867 219 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 214 219 IPR002347 -
Car06g00867 219 PRINTS Glucose/ribitol dehydrogenase family signature 61 78 IPR002347 -
Car06g00867 219 PRINTS Glucose/ribitol dehydrogenase family signature 137 148 IPR002347 -
Car06g00867 219 PRINTS Glucose/ribitol dehydrogenase family signature 186 202 IPR002347 -
Car06g00867 219 PRINTS Glucose/ribitol dehydrogenase family signature 214 219 IPR002347 -
Car06g00867 219 PIRSF 11-beta-HSD1 10 219 - -
Car06g00867 219 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 21 219 - -
Car06g00867 219 Gene3D - 54 219 - -
Car06g00867 219 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 58 219 IPR036291 -
Car06g00867 219 Pfam short chain dehydrogenase 61 219 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00867 Car-Chr6 8471359 8472018 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00867 17 218 Lipid Metabolism Gene Families AT1G67730 48.515 9.28e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00867 K10251 - mnt:21410235 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00867 06 8471359 8472018 Car06g00867 06 8471359 8472018 ECH
Car06g00867 06 8471359 8472018 Car05g02061 05 65854179 65857155 PCT