Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02061 ATGGATTGCTGTATAATCAGTAAGCTCAAGACTCAACCTTTCTGGTTCATTATCCTCTTCGCCCTCGGTCTCCTCACCATTCTCAGATTCACTCTAACATTTCTCAATTGGCTCTATGTCAATTTTCTCAGACCCTCTAAAGATCTCAAAAAATACGGATCTTGGGCACTCGTTACTGGACCCACCGATGGCATTGGAAAAAGTTTCGCCTTTCAACTTGCTAGCAAAGGCTTGAACCTAATCCTCGTTGGACGAAACCCCGACAAGCTCAAAGACGTTTCGGATTCAATTCAAGCCAAGTTCGGAAATACTCAAGTTAAAACAATTGTAGTTGATTTCGCAGGTGATCTCGACGAGGGTGTTCAGCGAATTCGAGAAACGATTGAAGGGTTGGATATTGGGGTTTTGATTAACAACGTGGGAATTTCGTACCCTTATGCCAAATTCTTCCATGAAGTGGACGAAGAGCTTTTGAAGAATCTTATTAAGGTTAATGTTGTTGGAACTACTAAGGTTACTCAAGCTGTTTTGCCTGGGATGTTGAAGAGGAAGAAAGGAGCAATTGTTAACATTGGTTCTGGAGCTGCTATTGTTATTCCTTCTGATCCACTTTATGCTGTTTATGCTGCCACAAAAGCGTATATTGATCAGTTTTCAAGATCTCTCTATGTTGAATACAAGAAGAGTGGGATTGATGTACAGTGTCAGGTTCCATTATATGTGGCCACAAAAATGGCATCAATCAAGAAATCTTCATTCTTTGTCCCATCAACGGACGGCTATGCAAAAGCAGGTGTGAGATGGATAGGATATGAACCTCGTTGCACGCCATACTGGCCTCATACCCTTCTTTGGGCCGTGGCATACTCGTTGCCTGAGTTCATAGTTGATGCTTGGCGTCTGCAGTTTTGTATTGGTATTAGAAAGAGGGGACTGCTGAAAGATTCAAGGAAGAAGGATTGA 963 0.4226 MDCCIISKLKTQPFWFIILFALGLLTILRFTLTFLNWLYVNFLRPSKDLKKYGSWALVTGPTDGIGKSFAFQLASKGLNLILVGRNPDKLKDVSDSIQAKFGNTQVKTIVVDFAGDLDEGVQRIRETIEGLDIGVLINNVGISYPYAKFFHEVDEELLKNLIKVNVVGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRSLYVEYKKSGIDVQCQVPLYVATKMASIKKSSFFVPSTDGYAKAGVRWIGYEPRCTPYWPHTLLWAVAYSLPEFIVDAWRLQFCIGIRKRGLLKDSRKKD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02061 320 Pfam short chain dehydrogenase 55 247 IPR002347 -
Car05g02061 320 PIRSF 11-beta-HSD1 5 314 - -
Car05g02061 320 Gene3D - 49 267 - -
Car05g02061 320 PANTHER BETA-KETOACYL REDUCTASE 1-RELATED 4 319 - -
Car05g02061 320 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Car05g02061 320 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Car05g02061 320 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Car05g02061 320 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Car05g02061 320 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Car05g02061 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Car05g02061 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Car05g02061 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
Car05g02061 320 PANTHER RH59310P 4 319 - -
Car05g02061 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 298 IPR036291 -
Car05g02061 320 CDD 17beta-HSD1_like_SDR_c 53 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02061 Car-Chr5 65854179 65857155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02061 1 320 Lipid Metabolism Gene Families AT1G67730 65.938 2.05e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02061 K10251 - jre:108990665 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02061 05 65854179 65857155 Car05g02061 05 65854179 65857155 ECH
Car06g00867 06 8471359 8472018 Car05g02061 05 65854179 65857155 PCT