Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00843 ATGTTGTTTGGTGAAACAGCAGTACCAGCGATAATGAGGTGTTTCGCACTGTGCTTAGTATCTTTCTGGGTTCTCTTTGCTTTCAGGTTTCAGAGTGTGTCATCACAAAATTTATCTGAGAGTTACCTTCAACAAGCTGTCTTACCACCAAGAGGTTGGAATTCCTATGATTCCTTTATCTGGACAATTTCTGAAGCAGATTTCTTACAGAATGCTGAAGTAGTTGCTCAGCGTCTTCGTCCTCATGGATATGAGTTTGTTGTGGTGGATTACCTCTGGTATAGGAAGCTAGTCCAGGGTGCCAATACTAATTCTCTTGGATTCGATGTGATCGATGGATGGGGAAGGATGGCCCCTGATCCAGTTAGGTGGCCTTCTTCCAATGGTGGGAAGGGATTCAGTGAAGTAGCTAAGAAAGTACATAGCGTGGGTTTGAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCAGTGAATGCAAACACCCCTATACTAGATATAACAACGGGCCGTGCTTATCAAGAATCTGGTCGAGTGTGGTATGCAAAAGACATAGCAATACCAGAAAGGACTTGTGCATGGATGTCAAATGGTTTCATGAGTGTAAATACCGAGTTGGGAGCAGGGAGAGCTTTTTTGAGATCCCTTTATGAGCAGTATGCTTCTTGGGGTGTTGATCTCGTGAAACATGATTGTGTGTTTGGCAATGACTTGGATTTAAATGAGATAACCTATGTATCCTCGGTTCTCAGCCAGCTTAGTCATAATGTTGTGTATTCTATATCGCCTGGAACCGGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTAGTCAACATGTATCGAATAACAGGAGACGATTGGGATACATGGGGAGATGTCAAGGCTCATTTTGATGTAACAAGGGATTTTTCTACCGCTAATATGATTGGCGCAAAAGGTTTAAAGGGGAGTTCATGGCCTGATTTGGACATGCTACCGTTCGGATGGCTATCCAATGCAGATTCAAATGAAGGTCCACACAGGTATAGTAACCTGACTCCAGATGAGCAAAGGACACAGATGACTTTATGGGCTTTGGCAAAATCTCCCCTTATGTATGGAGGTGATGTGCGGAAGATCAATCCTGCCACATATGATATTATCACGAATCCTACCTTGCTAGAGATTAATCATTTCAGTTCAAATAATATGGAGTTTCCTTATATCACAAGCTCGAATAACTTGAAGAGTGAATATCGTCCTCTTAGAGAGCAAACAAGAATGTCTACAAAAGGAAAGAAATTCAAACCTTCATTAGACCTCACTAGCTGCACTGAATCAAAGGCAAGTGGTTGGACTACTGAAAATCTTAACAAAGATCTTGAAAGAATCTGTTGGAAAGGGAGTTTAGAAAACGAGCCTCGGAACCCTTTCTGCGTACACAAGAGAGATCTTCAGTTCAGATTAGATGGTAAGAGTATGTATCAAGAGGATTTTAGAGGGAAACATCAATTAGTTGCAACCAGTAACATGAGATCTTGCTTGGATGCTTCTCCAAAACGAAAGGTTACTTCCAAAGAGTCCAAAAGAGGAACATTTTCTCCTTGTAAAAGGGATTCAAACCAGATTTGGGAGCTAAACTCCAATGGGACCCTTGTAAATAGTTACTCAGGTCTTTGTGCAACAGTGAATTACGTAGAAGCTAATGATTATTCGGGTGTGAGTGGGATTCGCTCATGGATTGCAACGGGAAGAAACGGCGAAGTGTATTTGGCATTCTTCAATTTAAATGAACAGAAGACGGCAATACATGCAAAGACATCAGATTTGGCTAAGGTTTTTCCTGACAGACACATCAATTCCTGTCAAGGTAAGGAATTGTGGAGTGGAAAGAATGTTGTACGAACGCAACGAACGTTTTCAATGGATGTAGAAGTACACGGATCTGCACTATTTGTTCTAAATTGCAACTAG 1965 0.4178 MLFGETAVPAIMRCFALCLVSFWVLFAFRFQSVSSQNLSESYLQQAVLPPRGWNSYDSFIWTISEADFLQNAEVVAQRLRPHGYEFVVVDYLWYRKLVQGANTNSLGFDVIDGWGRMAPDPVRWPSSNGGKGFSEVAKKVHSVGLKFGIHVMRGISTQAVNANTPILDITTGRAYQESGRVWYAKDIAIPERTCAWMSNGFMSVNTELGAGRAFLRSLYEQYASWGVDLVKHDCVFGNDLDLNEITYVSSVLSQLSHNVVYSISPGTGVTPAMAKDVSGLVNMYRITGDDWDTWGDVKAHFDVTRDFSTANMIGAKGLKGSSWPDLDMLPFGWLSNADSNEGPHRYSNLTPDEQRTQMTLWALAKSPLMYGGDVRKINPATYDIITNPTLLEINHFSSNNMEFPYITSSNNLKSEYRPLREQTRMSTKGKKFKPSLDLTSCTESKASGWTTENLNKDLERICWKGSLENEPRNPFCVHKRDLQFRLDGKSMYQEDFRGKHQLVATSNMRSCLDASPKRKVTSKESKRGTFSPCKRDSNQIWELNSNGTLVNSYSGLCATVNYVEANDYSGVSGIRSWIATGRNGEVYLAFFNLNEQKTAIHAKTSDLAKVFPDRHINSCQGKELWSGKNVVRTQRTFSMDVEVHGSALFVLNCN 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00843 654 Gene3D - 476 572 - -
Car06g00843 654 SUPERFAMILY Ricin B-like lectins 499 566 IPR035992 -
Car06g00843 654 Pfam Alpha galactosidase A 220 394 IPR002241 GO:0004553|GO:0005975
Car06g00843 654 PRINTS Glycosyl hydrolase family 27 signature 43 62 IPR002241 GO:0004553|GO:0005975
Car06g00843 654 PRINTS Glycosyl hydrolase family 27 signature 137 158 IPR002241 GO:0004553|GO:0005975
Car06g00843 654 PRINTS Glycosyl hydrolase family 27 signature 352 373 IPR002241 GO:0004553|GO:0005975
Car06g00843 654 SUPERFAMILY Glycosyl hydrolase domain 571 652 - -
Car06g00843 654 CDD GH27 49 394 IPR002241 GO:0004553|GO:0005975
Car06g00843 654 PANTHER ALPHA-GALACTOSIDASE 13 651 - -
Car06g00843 654 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 13 651 IPR002241 GO:0004553|GO:0005975
Car06g00843 654 Pfam Alpha galactosidase C-terminal beta sandwich domain 574 651 IPR041233 -
Car06g00843 654 SUPERFAMILY (Trans)glycosidases 46 394 IPR017853 -
Car06g00843 654 Gene3D - 573 653 IPR013780 -
Car06g00843 654 Gene3D Aldolase class I 41 397 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00843 Car-Chr6 8281821 8287074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00843 22 480 Glycoside Hydrolase AT3G26380 61.874 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00843 - - gmx:100802840 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00843 06 8281821 8287074 Car06g00843 06 8281821 8287074 ECH
Car06g00843 06 8281821 8287074 Car05g02084 05 66077084 66082638 PCT