Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02084 ATGAAGTGTTTCCTCATCTCTCTCTGCATTCTCCTCTGTTTTCAACAAGGTGTGAAGTCTAAAAATGTATCTGATAGTGACCTACAGCTAGCTAGCATCCCACCAAGAGGTTGGAATTCTTATGATTCTTTTAGCTGGACAATTTCTGAACAAGAATTCTTACAAAGTGCTGAAATAGTTTCTCAGCGTCTCCATGATCATGGATACGAGTATGTGGTGGTGGATTATCTCTGGTATAGAAGGAAAGTCGAGGGCGCTTATCATGATTCTCTTGGATTCGATGTGATTGATGAATGGGGAAGGATGATTCCTGACCCAGGAAGATGGCCTTCTTCACAAGATGGCAAAGGGTTCAGTGAAGTAGCTAATGGAGTGCATAGCATGGGTTTAAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCTGTCAATGCAAACACGCCTATCCTAGATACAGCAACGGGAGGTGCATATCAAGAATCTGGTCGAGTGTGGCGTGCAAAAGACATAGCGATCCGTGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAGATATAAAGTTGGGTGCTGGCAAAGCCTTTTTGAGGTCCCTTTATGAGCAGTATGCTGCATGGGGTGTTGATTTTGTGAAACATGACTGTGTATTTGGCGATGACTTGGATTTGAATGAAATAAGCTATGTATCAGAGGTTCTTCGGGAGCTTGATCGCGCCATTGTCTATTCTTTGTCTCCCGGAACCAGTGTGACACCAGCCATGGCCAAGGATGTCAGTGGATTGGTCAACTTGTATCGTATAACAGGAGATGACTGGGATACGTGGGGGGATGTCAAAGCTCATTTTGATGTGTCGAGGGATTTTGCAACTGCTAATATGATAGGAGCAAAAAGTTTAATGGGGAACTCATGGCCAGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCTGGTTCAAATGAAGGTCCACATAGGTATAGTAACCTCCACCTAGAAGAGAAGAAGACACAGATGACCCTGTGGGCAATGGCAAAGTCTCCCCTTATGTATGGCGGAGATGTAAGGAAGATTGATCCCACAACATATGATCTTATCACAAATCCTATCATTCTGGAGATTAATTCTTTTAGCACAAATAATATGGAGTTTCCTTATATCTCAAGCCTCAATAGCGAAGATCAGGATTCTGGAAGGCAAATGAGAAGAAGCTACAGAGAAATAAAAACATCATACACACATTCATTAAGCCTCACTAGCTGCACCGAGTCAAATGCAAATGGTTGGACTAGTGAAAGTCTTAACCAAAATCTTGAAAGAATCTGTTGGAAAAGGAATTTCGGATACAAGCATCTTGCCCCCCTCTGTTTGCACAAGAGAGAACTGAACTTTATATCAGATGAAGAGAATGTATATCAAGATTATCATCAAGGGAAATATCATTTAGTTGCAGTTGACAGAATAAAATTTTGCTTGGACGCTTCTCCAAAACGAAAGCTTACTTCAAAAGAGTTCGAGAGAGGTACATTTTCTCCCTGCAGGTGGGATTCAAATCAGATGTGGCAGTTGAATCTTAATGGGACCCTAGTAAATAGCTATTCTGGCTTATGTGCAACAGTAAAGCCTGTCAAAGCTACAATTAATTCTGCTGGTTTTCGCTCTTGGGTTGCAACAGGAAGAACAGGAGAAATCTATGTGGCTTTCTTCAACCTAAGTGATCAGAAGGCGGTTATATCGGCGCAAACATCAGACATAGCTAAGGTATTTCTTGGAAGAGACTTAAGTGCTTGTAAAGGCAGTGAAGTGTGGAGTGGAAGTGACATTGAAATAACACAGGGGACGTTATCAGCTGAAGTGGAAATGCATGGAACTGCACTATTTGTTCTTAACTGCCACTTAGTTTGGTCCCCCCAAAAAAGTAGTATGTAA 1941 0.4199 MKCFLISLCILLCFQQGVKSKNVSDSDLQLASIPPRGWNSYDSFSWTISEQEFLQSAEIVSQRLHDHGYEYVVVDYLWYRRKVEGAYHDSLGFDVIDEWGRMIPDPGRWPSSQDGKGFSEVANGVHSMGLKFGIHVMRGISTQAVNANTPILDTATGGAYQESGRVWRAKDIAIRERACAWMPHGFMSVDIKLGAGKAFLRSLYEQYAAWGVDFVKHDCVFGDDLDLNEISYVSEVLRELDRAIVYSLSPGTSVTPAMAKDVSGLVNLYRITGDDWDTWGDVKAHFDVSRDFATANMIGAKSLMGNSWPDLDMLPFGWLTDPGSNEGPHRYSNLHLEEKKTQMTLWAMAKSPLMYGGDVRKIDPTTYDLITNPIILEINSFSTNNMEFPYISSLNSEDQDSGRQMRRSYREIKTSYTHSLSLTSCTESNANGWTSESLNQNLERICWKRNFGYKHLAPLCLHKRELNFISDEENVYQDYHQGKYHLVAVDRIKFCLDASPKRKLTSKEFERGTFSPCRWDSNQMWQLNLNGTLVNSYSGLCATVKPVKATINSAGFRSWVATGRTGEIYVAFFNLSDQKAVISAQTSDIAKVFLGRDLSACKGSEVWSGSDIEITQGTLSAEVEMHGTALFVLNCHLVWSPQKSSM 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02084 646 Gene3D Aldolase class I 12 381 IPR013785 -
Car05g02084 646 CDD GH27 34 379 IPR002241 GO:0004553|GO:0005975
Car05g02084 646 SUPERFAMILY Glycosyl hydrolase domain 551 634 - -
Car05g02084 646 PRINTS Glycosyl hydrolase family 27 signature 28 47 IPR002241 GO:0004553|GO:0005975
Car05g02084 646 PRINTS Glycosyl hydrolase family 27 signature 122 143 IPR002241 GO:0004553|GO:0005975
Car05g02084 646 PRINTS Glycosyl hydrolase family 27 signature 337 358 IPR002241 GO:0004553|GO:0005975
Car05g02084 646 PANTHER ALPHA-GALACTOSIDASE 6 633 - -
Car05g02084 646 Pfam Alpha galactosidase A 47 142 IPR002241 GO:0004553|GO:0005975
Car05g02084 646 Pfam Alpha galactosidase A 205 379 IPR002241 GO:0004553|GO:0005975
Car05g02084 646 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 6 633 IPR002241 GO:0004553|GO:0005975
Car05g02084 646 Pfam Alpha galactosidase C-terminal beta sandwich domain 557 633 IPR041233 -
Car05g02084 646 Gene3D - 548 635 IPR013780 -
Car05g02084 646 SUPERFAMILY Ricin B-like lectins 493 551 IPR035992 -
Car05g02084 646 SUPERFAMILY (Trans)glycosidases 29 379 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02084 Car-Chr5 66077084 66082638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02084 7 465 Glycoside Hydrolase AT3G26380 65.944 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02084 - - gmx:100777954 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00843 06 8281821 8287074 Car05g02084 05 66077084 66082638 PCT