Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00564 ATGGGAGAGGaagaaaagaaaccagaggaaaacaaagtggaagagaaaaaaccggaggaagaaccgaagaaagaagaagagaagaaagaaacgcaagaaggagatggaaAACCAACAGCCGAAGAGAAAAAACCGGAGGAATCTACGAATGAAACTGCACCACCGCCAGAAATTGTGCTTAAAGTATTCATGCATTGTGAAGGTTGTGCTCGCAAGGTTCGTCGTTCACTCAAAGGATTTTCAGGAGTTGAAGATGTTGTAACTGATTGCAAATCTCACAAGGTTGTTGTTAAAGGAGAAAAAGCGGATCCGTTGAAGGTTCTAGAAAGAGTACAGAGGAAGAGTCATAGACAAGTTGAACTTCTTTCCCCGATCCCAAAACCACCGACCGAAGATGAGAAAAAATCTGAAGAGAATGAGAAACCTAAGCCAGAGGAAGAGAAAAAAGAAGAGCCTCAGATTACTACTGTGATTCTGAAAGTTCACATGCATTGTGAAGCTTGTTCGCAGGAAATTAAGAAACGCATTGAAAGAATCAAAGGAGTTGAATCAGCTGAACCAGATCTGAAGAACTCACTTGTGACAGTGAAGGGAGTACTTGAAACTGAGAAGTTAGTGGAATATGTGTACAAGAGAACTGGGAAACAAGCAGTGATAGTGAAACAAGAACCAGAGAAAAAAGAGGAAGCAAAAGAAACCAAAGAGGAAGAGAAAAAAACCGAGGAAAATGAGAAAGATCAGAAAAAGAGTGGTGAAGGAGAGGAAAAGAAAGAAGCTGTAGAAGGAGATGGTGAAAAATCAGGTGGTGATGGAGGTGGTGCAGAGGAAACTAAAGTTGTGGAAATGAAGAAAAATGAATACTATTACAAGTATGGAACGGAGGTTTTTGCATATCCTGATCCAGCATACCCTCTTCAAGCTTATCCTCCTCAGATTTTCAGTGATGAGAACCCAAATGCTTGCTCTGTTATGTAA 975 0.3662 MGEEEKKPEENKVEEKKPEEEPKKEEEKKETQEGDGKPTAEEKKPEESTNETAPPPEIVLKVFMHCEGCARKVRRSLKGFSGVEDVVTDCKSHKVVVKGEKADPLKVLERVQRKSHRQVELLSPIPKPPTEDEKKSEENEKPKPEEEKKEEPQITTVILKVHMHCEACSQEIKKRIERIKGVESAEPDLKNSLVTVKGVLETEKLVEYVYKRTGKQAVIVKQEPEKKEEAKETKEEEKKTEENEKDQKKSGEGEEKKEAVEGDGEKSGGDGGGAEETKVVEMKKNEYYYKYGTEVFAYPDPAYPLQAYPPQIFSDENPNACSVM 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00564 324 Coils Coil 223 251 - -
Car06g00564 324 MobiDBLite consensus disorder prediction 1 57 - -
Car06g00564 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 324 IPR044577 GO:0046872
Car06g00564 324 Gene3D - 55 127 - -
Car06g00564 324 MobiDBLite consensus disorder prediction 223 279 - -
Car06g00564 324 SUPERFAMILY HMA, heavy metal-associated domain 59 114 IPR036163 GO:0046872
Car06g00564 324 MobiDBLite consensus disorder prediction 127 153 - -
Car06g00564 324 MobiDBLite consensus disorder prediction 1 50 - -
Car06g00564 324 ProSiteProfiles Heavy-metal-associated domain profile. 64 120 IPR006121 GO:0046872
Car06g00564 324 SUPERFAMILY HMA, heavy metal-associated domain 154 219 IPR036163 GO:0046872
Car06g00564 324 ProSiteProfiles Heavy-metal-associated domain profile. 163 219 IPR006121 GO:0046872
Car06g00564 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 1 324 - -
Car06g00564 324 MobiDBLite consensus disorder prediction 116 153 - -
Car06g00564 324 Pfam Heavy-metal-associated domain 160 214 IPR006121 GO:0046872
Car06g00564 324 Pfam Heavy-metal-associated domain 60 113 IPR006121 GO:0046872
Car06g00564 324 CDD HMA 159 217 IPR006121 GO:0046872
Car06g00564 324 CDD HMA 64 120 IPR006121 GO:0046872
Car06g00564 324 Gene3D - 152 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00564 Car-Chr6 5663327 5665368 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00564 - - lang:109362245 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00564 06 5663327 5665368 Car05g02634 05 71348413 71350285 PCT