LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car05g02634	ATGGGGGAGGAAGAAAAGAAAACAGAGGAATCGAAAACAGAAGAAAAAAGCAAGGCGGAGGAAAAACAAGAGGAAGGTGGTGGTCCTCCGCCACCAGCGGCGGAGATTGTGCTGAAAGTGTTCATGCATTGTGAAGCTTGTGCTCGAAAGGTTCGTTGGTCGTTGAAAGATTTCCCAGGGGTTGAAGACGTGATAACGGATTGCAAATCTCATCAGGTGGTTGTTAAAGGTGAGAAGGCAGATCCATTAAAGGTTTTGGAGAGAGTTCAGAAGAAGAATCGTAGAAAAGTTGAGCTTCTTTCTCCGATCCCAGATACTCCTCAGGTGGAAAAACCCTCACAGGAAGTGAACCCTCCGGAGAAAGAGAAGAAAGAAGAGCCATTAACTGTTGTTCTGAAAGTTCACATGCACTGTGAAGCTTGTGCGCATGAGATCAAAAAACGCATCCAGAGAATGAAAGGAGTGGAATTGGCAGAAGCAGATTTGAAAAAGTCAGAGGTAACGGTGAAAGGGGTGTACGATCCAGCAATGTTGGTTGAATACGTTTACAAGCGAATTGGGAAGCATGCAGTGATAATGAaggaagagaaaacagtaggggaaggtgcagcaaaagaggaagaaggtgaaagcaaagaaaaagaaaagaaagaggaaAATATAGAAGAGATGAAAAGAATGGAATATTACTTTCATAATCCATCAATGGATATTATGTATGCATACCCTTCTGCTAACTATTATCAAACATACCCGCCTCCACCTCCACCTCAGCTTTTCAGTGATGAGAATCCAAATGCTTGCACTCTCATGTAA	816	0.3909	MGEEEKKTEESKTEEKSKAEEKQEEGGGPPPPAAEIVLKVFMHCEACARKVRWSLKDFPGVEDVITDCKSHQVVVKGEKADPLKVLERVQKKNRRKVELLSPIPDTPQVEKPSQEVNPPEKEKKEEPLTVVLKVHMHCEACAHEIKKRIQRMKGVELAEADLKKSEVTVKGVYDPAMLVEYVYKRIGKHAVIMKEEKTVGEGAAKEEEGESKEKEKKEENIEEMKRMEYYFHNPSMDIMYAYPSANYYQTYPPPPPPQLFSDENPNACTLM	271

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car05g02634	271	MobiDBLite	consensus disorder prediction	1	25	-	-
	Car05g02634	271	Pfam	Heavy-metal-associated domain	38	92	IPR006121	GO:0046872
	Car05g02634	271	Pfam	Heavy-metal-associated domain	132	180	IPR006121	GO:0046872
	Car05g02634	271	Coils	Coil	5	25	-	-
	Car05g02634	271	SUPERFAMILY	HMA, heavy metal-associated domain	37	93	IPR036163	GO:0046872
	Car05g02634	271	SUPERFAMILY	HMA, heavy metal-associated domain	126	196	IPR036163	GO:0046872
	Car05g02634	271	Coils	Coil	204	227	-	-
	Car05g02634	271	CDD	HMA	131	190	IPR006121	GO:0046872
	Car05g02634	271	ProSiteProfiles	Heavy-metal-associated domain profile.	136	169	IPR006121	GO:0046872
	Car05g02634	271	MobiDBLite	consensus disorder prediction	102	125	-	-
	Car05g02634	271	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	1	271	IPR044577	GO:0046872
	Car05g02634	271	CDD	HMA	42	92	IPR006121	GO:0046872
	Car05g02634	271	PANTHER	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7	1	271	-	-
	Car05g02634	271	ProSiteProfiles	Heavy-metal-associated domain profile.	42	91	IPR006121	GO:0046872
	Car05g02634	271	MobiDBLite	consensus disorder prediction	1	34	-	-
	Car05g02634	271	Gene3D	-	124	193	-	-
	Car05g02634	271	MobiDBLite	consensus disorder prediction	199	219	-	-
	Car05g02634	271	Gene3D	-	33	104	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car05g02634	Car-Chr5	71348413	71350285	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car05g02634	-		-	cam:101507929	422.55

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car05g02634	05	71348413	71350285	Car05g02634	05	71348413	71350285	ECH
	Car06g00564	06	5663327	5665368	Car05g02634	05	71348413	71350285	PCT