Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00450 CCTGTCTATCGTAGCATTTTCTCTAAGGATCTCTCTCCTCCTTCAATCCAAGGTCTTGATTCATGTTGGGATGTTTTCAGGACAGCTGTTGAGAAGTATCCAACAAATCGAATGCTTGGTCGCCGTGAAATAGTGGATGGGAAAGCTGGCGAATTCAAGTGGCAAACTTACCAAGAAGTGTATGACTTGGTGATCAAAGTTGGAAATTCCATCCGTGCTTGTGGCTATGGGGAAGGAGTAAAATGTGGCATTTATGGTGTCAATAGTCCAGAATGGATTATAAGCATGGAGGCCTGCAATGCTCATGGACTTTATTGTGTCCCTTTATATGATACCTTAGGTGCTGGGGCTGTGGAATTTATTATTTGCCATGCAGAGGTCACAATTGCATTTGTTGAAGAAAAGAAGATATCTGAGCTATTGAAGACATTTCCTAATGCAGCAAAGTATCTCAAGACACTTGTGAGCTTTGGAAAGGTCACTCCAGAACAAAAGCAAGAAGTTGAGAAGTTTGGGCTGACAATATATACATGGGATGAATTTTTACAATTGGGTAATGATCAAAGTTTTGATTTACCTGTGAAAAAGAAAAGTGACATATGCACAATAATGTACACAAGTGGAACTACTGGTGATCCCAAAGGAGTATTGATTTCCAATGAGAGCATTATTACACTCTTAGCTGCCATTAAGCAGCTATTAGCATGTTGCAAAGAACAATTGCATGAGAAAGATGTATACCTATCATACCTTCCACTTGCACACATCTTTGACAGGATTGTTGAGGAAGCTATGATATGGCACGGGGCTTCAATTGGTTTCTGGCGTGGGGATGTCAAATTGTTGATGGAAGACATTGGTGAGTTAAAACCAACTATTTTTGTTGCTGTTCCACGTGTGCTTGATAGAGTTTACACTGGTTTGACACAAAGGGTTTCTACAGGGAACTTGTTGAAACAGACTATGTTCAATATTGCCTACACATACAAGCTGCATAACATGAGCAAAGGGCAAAAACATGATGCAGCCTCTCCATTATTTGACAAAATTATATTCAATAAGGTAAAACAAGCTTTAGGGGGTAGTGTACGCATTGTTTTGTCCGGAGCAGCGCCTCTATCTAAACACGTCGAAGGTTTCATGCGAGTGGTGACTTGTGCTCATATCTTACAAGGATACGGTCTGACTGAAACATGTGCTGGAACCTTTGTGTCATTACCGAACGAAAACGATATGCTTGGTACGGTTGGGCCTCCTGTACCATATGTGGATGTGTGTCTAGAATCTGTACCTGAAATGGGATATGATGCACTTGCAACCCCAGCAAGAGGAGAAATCTGTGTGAAAGGAAGTCCTGTGTTTTCAGGCTACTACAAACGTGAAGACCTCACCAAAGAGGTTATGATTGATGGATGGTTCCATACAGGAGATGTTGGAGAGTGGCTGCCTAATGGAACCATGAAAATTATCGATCGGAANNNNNNNNNNTTTAAGCTTTCACAAGGAGAGTATGTTGCTGTTGAAAACCTTGAGAATATTTATGTTCAAGTTCCTGCTATTGAATCGATTTGGATCTATGGAAATAGTTTTGAATACTTCCTTGTGGCTATTATTAACCCAAGCAAGGTAGCAATTGAAGCTTGGGCAGCACAAACTGGTATAAATATGGACTATGATGCTCTCTGTGAAGATTCTAGGACGAAAAGTTACATACTCGGAGAGCTCACAAAGATTGCAAAGGAAAAGAAGTTGAAAGGTTTTGAGTTTATCAAAACTATTCATCTTGATCCAGTTCCATTTGACATGGAACGTGATCTCACCACACCAACATTTAAGAAAAAGAGACCCCAGTTGCTTAAATACTATCAGAGTGTCATTAACGAAATGTACGAGAAGGAAAAGAAACCAAGTGCATGA 1917 0.4011 PVYRSIFSKDLSPPSIQGLDSCWDVFRTAVEKYPTNRMLGRREIVDGKAGEFKWQTYQEVYDLVIKVGNSIRACGYGEGVKCGIYGVNSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVTIAFVEEKKISELLKTFPNAAKYLKTLVSFGKVTPEQKQEVEKFGLTIYTWDEFLQLGNDQSFDLPVKKKSDICTIMYTSGTTGDPKGVLISNESIITLLAAIKQLLACCKEQLHEKDVYLSYLPLAHIFDRIVEEAMIWHGASIGFWRGDVKLLMEDIGELKPTIFVAVPRVLDRVYTGLTQRVSTGNLLKQTMFNIAYTYKLHNMSKGQKHDAASPLFDKIIFNKVKQALGGSVRIVLSGAAPLSKHVEGFMRVVTCAHILQGYGLTETCAGTFVSLPNENDMLGTVGPPVPYVDVCLESVPEMGYDALATPARGEICVKGSPVFSGYYKREDLTKEVMIDGWFHTGDVGEWLPNGTMKIIDRXXXXFKLSQGEYVAVENLENIYVQVPAIESIWIYGNSFEYFLVAIINPSKVAIEAWAAQTGINMDYDALCEDSRTKSYILGELTKIAKEKKLKGFEFIKTIHLDPVPFDMERDLTTPTFKKKRPQLLKYYQSVINEMYEKEKKPSA 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00450 638 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 632 - -
Car06g00450 638 Gene3D - 18 492 IPR042099 -
Car06g00450 638 CDD LC-FACS_euk 50 630 IPR045311 GO:0004467|GO:0006631
Car06g00450 638 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 1 632 - -
Car06g00450 638 Pfam AMP-binding enzyme 41 499 IPR000873 -
Car06g00450 638 SUPERFAMILY Acetyl-CoA synthetase-like 20 632 - -
Car06g00450 638 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00450 Car-Chr6 4567192 4578550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00450 1 631 Acyl Lipid Metabolism Gene Families AT4G23850 72.425 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00450 K01897 - gmx:100811306 1095.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00450 06 4567192 4578550 Car06g00450 06 4567192 4578550 ECH
Car08g00180 08 1400168 1410607 Car06g00450 06 4567192 4578550 PCT