Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00439 ATGCTCGTTGCACCCAAAAGAGAAAGAATCAAATTAGAAAATAGAAACACCAGTGACTGCCGTGGAAAGAATAAGGAAAAACTCAAAGACGAATCAGGAACACACACACTGGAAATCCACATGGATGATCTccacaccgtcCTCCAGCTTCTTCTCGGCGGTTACAAGGCCGTCGTCGTAGACAATCTCGACAATTCTTCTGAAAAATCCATCCACAGAGTCAAGGAACTCGCCGGTGATTTCGCCGGTAACCTTTCATTTCACAAGTTAGACCTGCGGGACAGAGATGGAATCGAGAAGATATTTTCTTCCACAAAGTTTGATGCTGTCATACATTTTGCTGGACTGAAAGCAGTAGGTGAAAGTGTGCAAAAACCACTCCTCTACTATGACAACAACTTGATAGGGACAATTGTTCTATTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCCTCTTCAGCCACTGTATATGGTTGGCCAAAGGAGGTCCCTTGTACTGAAGAGTTCCCTTTATCAGCTGCAAACCCATATGGAAAAACCAAGCTATACATTGAAGAGATTTGTCGTGATATATACCGTGCAGAACCAGACTGGAAAATAACACTTTTGAGATACTTCAACCCAGTTGGTGCACATCCTAGTGGTAATATTGGTGAGGATCCTCGTGGAATTCCTAACAACCTCATGCCTTTTGTTCAACAAGTAGCAGTTGGCAGACGCCCTGCATTGACAATTTTTGGAACAGATTATAATACAAGTGACGGAACTGGAGTTCGCGATTACATTCATGTTGTTGATTTAGCAAATGGACACATTGCTGCATTGTGCAAACTAGACGATCCTAACACAGGCTGTGAGGTTTATAACTTGGGAACAGGAAAGGGGACATCAGTTCTGGAGATGGTTACAGCTTTTGAACAGGCCTCTGGAGTGAAAATTCCAGTTGTTAAGGCTGATCGGAGACCTGGAGATGCTGAAGTTGTTTATGCATCAACAAAAAAAGCAGAAAGAGAACTTAACTGGAAGGCAAAATATGGCATCGATGATATGTGCCGGGACCAATGGAATTGGGCCAGCAAAAACCCTTACGGCTATGGTGAATCCTGA 1119 0.429 MLVAPKRERIKLENRNTSDCRGKNKEKLKDESGTHTLEIHMDDLHTVLQLLLGGYKAVVVDNLDNSSEKSIHRVKELAGDFAGNLSFHKLDLRDRDGIEKIFSSTKFDAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGKTKLYIEEICRDIYRAEPDWKITLLRYFNPVGAHPSGNIGEDPRGIPNNLMPFVQQVAVGRRPALTIFGTDYNTSDGTGVRDYIHVVDLANGHIAALCKLDDPNTGCEVYNLGTGKGTSVLEMVTAFEQASGVKIPVVKADRRPGDAEVVYASTKKAERELNWKAKYGIDDMCRDQWNWASKNPYGYGES 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00439 372 CDD UDP_G4E_1_SDR_e 45 361 IPR005886 GO:0003978|GO:0006012
Car06g00439 372 PANTHER UDP-GLUCOSE 4-EPIMERASE 45 371 - -
Car06g00439 372 Pfam GDP-mannose 4,6 dehydratase 45 357 IPR016040 -
Car06g00439 372 Gene3D - 45 302 - -
Car06g00439 372 Gene3D - 221 362 - -
Car06g00439 372 TIGRFAM galE: UDP-glucose 4-epimerase GalE 45 367 IPR005886 GO:0003978|GO:0006012
Car06g00439 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 368 IPR036291 -
Car06g00439 372 PANTHER UDP-GLUCOSE 4-EPIMERASE 5 45 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00439 Car-Chr6 4495793 4501383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00439 60 346 Miscellaneous Gene Families AT4G00110 27.124 1.57e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00439 K01784 - gmx:100792137 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00439 06 4495793 4501383 Car06g00439 06 4495793 4501383 ECH
Car08g00176 08 1364310 1368360 Car06g00439 06 4495793 4501383 PCT