Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00434 ATGTCGGTTGCTTTGAGTTCAAGGGTATATTGGGAAGGTCATCCAGGACATTGTTCTGTTGACCCTATCCTGATTTACCTCACCGTGGATAATGTTGTTACCCCAATGCGTGTTTTTGAGTCTGATTCAATTGCTTCTGTGAAATTGAGGATTCAACAATGTAAAGGTTTTGTTGTGAAGAAACAGAAGCTTGTTTTTAGTGGAAGAGAGCTTGCTAGAAATGATACACCTGTTAAGGAGTACGGTGTTGCCGATGGCAATGTTCTTCATTTGGTTTTACGCCTTTCTGATTTACTTTTCATTGTTGTTAGGACTGTTTCTGGGAAGGAATTTGAGTTTCATATTGATAGGCATAGAAATGTGGGGTATCTTAAGCAAAGGATTAGAAAAAAGAAAGGTAAACAAGGTTTCATTGATCTTGAGGATGTTGATGATGATCAAGAGCTTTTCTGTGATGATGAGAAGCTTGATGATCATAGACTTTTTCATGATATATGTAAAGGTGATGATGGTGTAGTTCATTTGATTATTAAGAAATCGGTTAAGGTTAGAACTACACCTATTCATAATGATTTGAAGCTTTCTCTTGAGGCTTCTATAACTGGATTATTACAACAAGTAGAAGAGAATAAGAATAGGAGCAAACAGATTCAGATAGCTAAGATACCACCTGGTGTTGGTTTCTGGTTCGAACCTATTGTTGTCAATCCCAAGATCAATCTTTTTCCTTACCTTTGGGACATGATCAACTCCACATATGAGGGTTTGAAGACAGGAAATAGTCCTATTAGGTCATCGGAAGGCACCGGAGGGACTTATTTTATGCAAGATTTAACAGGTCAGAAGCATGTTTCGGTTTTCAAGCCCTTGGATGAGGAACCAATGGCTGTGAACAACCCGAGAGGCTTACCGACTTCGTTGAACGGCGAAGGTTTAAAAAGAGGAACAAGGGTGGGAGAAGGAGCTTTGAGGGAGGTTGCAGCTTTTATATTAGATCATCCAAGGAGCGGGCCGCGTTTGGTGTCCGGTGAAGAAATAGGGTTTTCTGGTGTTCCTCCTACTATTTTGGTGCAGTGCTTACACCAAGAATTTCACCACCCAAATGGGTATGCTTGCTCATCAAAACATGTCAAGATCGGGTCGTTACAGAAGTTTGTGAAGAACGACGGTAATTGTGAGGATATTGGACCTGGGGCCTTTCCAGTGGAGGAGGTGCATAAGATAACTGTGCTTGATTTAAGAATGGCTAATGCAGACAGGCATGCTGGGAATATTTTAATCAGAAAGGAGAAAGATGGCCAGATTAAGCTCATTCCCATTGATCATGGCTATTGTCTACCAGATCAATTTGAAGATTGCACATTTGATTGGCTTTATTGGCCACAAACACGTCAGCCTTACTCGCCCGAGTTAGTTGATTATATCAATTCTTTGGACGCTGAAAAAGACATTGAACTTTTGAAATATTATGGATGGGATATTCCACTTCAGTGTGCGCGGACACTACGTATTTCCACAATGCTGCTGAAAAAAGGGGTTCAGAGAGGTCTTACTCCTTATGCAATTGGAAGCATCATGTGTCGGGAAAATTTGAACAAGGAATCTGTAATTGAGGAAATTATAAGTGAAGCACAAGATTCCTTGCTTCCTGGCATGGAGGAATCGACATTTCTTGATTCTGTCTCCCAAATCATGGATTCCCGTCTTGATAAGCTTGCAAAATAG 1725 0.4052 MSVALSSRVYWEGHPGHCSVDPILIYLTVDNVVTPMRVFESDSIASVKLRIQQCKGFVVKKQKLVFSGRELARNDTPVKEYGVADGNVLHLVLRLSDLLFIVVRTVSGKEFEFHIDRHRNVGYLKQRIRKKKGKQGFIDLEDVDDDQELFCDDEKLDDHRLFHDICKGDDGVVHLIIKKSVKVRTTPIHNDLKLSLEASITGLLQQVEENKNRSKQIQIAKIPPGVGFWFEPIVVNPKINLFPYLWDMINSTYEGLKTGNSPIRSSEGTGGTYFMQDLTGQKHVSVFKPLDEEPMAVNNPRGLPTSLNGEGLKRGTRVGEGALREVAAFILDHPRSGPRLVSGEEIGFSGVPPTILVQCLHQEFHHPNGYACSSKHVKIGSLQKFVKNDGNCEDIGPGAFPVEEVHKITVLDLRMANADRHAGNILIRKEKDGQIKLIPIDHGYCLPDQFEDCTFDWLYWPQTRQPYSPELVDYINSLDAEKDIELLKYYGWDIPLQCARTLRISTMLLKKGVQRGLTPYAIGSIMCRENLNKESVIEEIISEAQDSLLPGMEESTFLDSVSQIMDSRLDKLAK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00434 574 Pfam Phosphatidylinositol 3- and 4-kinase 268 521 IPR000403 -
Car06g00434 574 CDD Ubl_ubiquitin_like 101 176 - -
Car06g00434 574 Pfam Ubiquitin family 31 95 IPR000626 GO:0005515
Car06g00434 574 MobiDBLite consensus disorder prediction 295 314 - -
Car06g00434 574 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 573 IPR044571 -
Car06g00434 574 SUPERFAMILY Ubiquitin-like 95 179 IPR029071 -
Car06g00434 574 Gene3D - 27 97 - -
Car06g00434 574 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 259 556 IPR000403 -
Car06g00434 574 SUPERFAMILY Ubiquitin-like 30 96 IPR029071 -
Car06g00434 574 SMART ubq_7 99 178 IPR000626 GO:0005515
Car06g00434 574 SMART ubq_7 23 94 IPR000626 GO:0005515
Car06g00434 574 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 8 573 - -
Car06g00434 574 Gene3D - 100 193 - -
Car06g00434 574 SUPERFAMILY Protein kinase-like (PK-like) 415 572 IPR011009 -
Car06g00434 574 ProSiteProfiles Ubiquitin domain profile. 25 94 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00434 Car-Chr6 4464496 4466451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00434 1 573 Acyl Lipid Metabolism Gene Families AT5G24240 56.672 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00434 - - gmx:100809172 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00434 06 4464496 4466451 Car06g00434 06 4464496 4466451 ECH
Car08g00171 08 1332408 1334730 Car06g00434 06 4464496 4466451 PCT