Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00331 ATGGAAATTAAGACAAGCCAACCAGTGGTAGCAAAGAAGTTATGGAACATGATACGTGTATTATTATTCATGATAAGAAAAGGCATAGCCAAGAGCAAAACAATGTTAGACCTCAATTTGATTCTCAAACGTGGTAAAGGCTTAATCAACACCATCATGTTCAACCACCAACTATATTATTCCTCCTTCACATGTCGCTCCCACAACACCGTTAACTCCTTCATATCTCCCTGTGAATACGAATTCAGCTGCAGCAACACCCCTGCCAACCCTCTCCACCACCACTCTAGCCGCCGCTTCTCCAAGTCGCGCCAAAGATACATGAATAATAATATTGCTGTTCAGAAGATGATTTTGAACAATGAAAATGTGGCTAATTCCCCTTTGGTTACATTGCCTGGTTTTGGGAAGAGCCCTGTTGGGAGACAACTGAGGGTTACTGATTCGCCTTTCCCGCTTAAAGACGAAGAAGGGGATAGTCATCAAGTGGACATGGCAGCTCAAGAATTCATTAACAACTTCTATAAACACCTCAACATGCAAAATAGAGCAATAGGTTCTTTTGAGTCGCCATACAATTACTTATGGGACAGATGA 597 0.4188 MEIKTSQPVVAKKLWNMIRVLLFMIRKGIAKSKTMLDLNLILKRGKGLINTIMFNHQLYYSSFTCRSHNTVNSFISPCEYEFSCSNTPANPLHHHSSRRFSKSRQRYMNNNIAVQKMILNNENVANSPLVTLPGFGKSPVGRQLRVTDSPFPLKDEEGDSHQVDMAAQEFINNFYKHLNMQNRAIGSFESPYNYLWDR 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00331 198 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 2 193 - -
Car06g00331 198 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 2 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00331 Car-Chr6 3544542 3545617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00331 - - mtr:MTR_8g102660 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00331 06 3544542 3545617 Car07g03171 07 59194393 59195426 ECH
Car06g00331 06 3544542 3545617 Car01g02753 01 52928560 52929426 ECH
Car06g00331 06 3544542 3545617 Car06g00331 06 3544542 3545617 ECH
Car06g00331 06 3544542 3545617 Car08g01787 08 27855777 27857005 PCT