Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00129 ATGGTTGATTTACATTGGAAATTAAACATGCCCAATTCCGACATGCCTTCCAAAGCTCCAAAACTTTCTCACTCCGAGAAATCTTCACCACGCACCTGCCTACCCTCTTTGCCACTACCTTCAATCACCAACGACATATCCGCGGCGGCGCCACCACTTTGTTTAGCTTACGACCACTATCTCCGCCTCCCGGAGCTCCGTAAGCTTTGGAATTCAAGAGAATTCCCTAACTGGAACAACGAATCAATCCTAAAACCAGCTTTACATGCACTCGAAATCACGTTCCGTTTCCTCTCTACGGTTCTCTCCGACCCCAGACCCTATGCTAACCACAGAGAATGGAACCGCATAATAGAGTCCATTGCCACGCGACAAATTGAAATAATCGCTATGCTATGCGAAGACGAGGAAAATAACCCCGAAACACGTGGCACAACACCAACCGCTTATCTCAGCAGCGGCAATAGCAATATCAGAAGCTACAGCGAAACTAGTCTTTTACCACGACTTGCCACGTGGTACAAATCAAAAGACGTAGCGCAGAGGATCCTTCTCTCTGTAGAGTGCCAAATGATGAGGTGTACCTACACGCTAGGTTTGGGAGAACCGAACCTCGCGGGAAAACCGACCCTCCGATACGACGACGTTTGCAAACCGAACGAAATCCACGCACTTAAAACGACGCCGTACGACGACCGAATCGAGAACTACGAAAATCACGCGGTTCACGCGACGCACCAGATCGTGGAGTCATGGATTCACGCGTCGCGGAAGCTTCTAGAAAGAATCGGCGAATCGATAAACGGAAGAAGGTTTGAGAAGGCGGCGGAGGATTGTTACACGGTGGAGAGGATCTGGAAGCTTCTAACGGAGGTTGAGGATGTTCATCTGATGATGGATCCAGGCGACTTCTTGAAACTGAAGAATCAATTATCGATGAAATCTTCTTGTTACGAAACGGCGTCGTTTTGTATGCGGTCAAAGGAGTTAGTTGAAGTGACGAAGATGTGTAGGGATTTGAGGCATAGAGTGCCGGAGATATTGGATGTTGAAGTGGATCCTAAAGGTGGGCCCAGGATACAAGAAGCGGCAATGAAACTTTATGTAATGGAGAAGATAAGTGGTTTCGAGAAGGTTCATTTGTTGCAGGCTATGCAGGGTATTGAGGTTGCGATGAAGAGATTCTTCTATGCGTATAAGCAGGTGTTGGCGGTGGTGATGGGGAGTTCTGAAGCTAATGGAAACCGAGTTGGGTTGAGTTGTGATGGCGGTGACTCGTTGACTCATATGTTTCTTGAACCTACCTATTTTCCAAGTTTGGATGCTGCGAAGACGTTTCTTGGATACTTTTGGGATAATGATAATAAATGGGTGTGA 1377 0.4728 MVDLHWKLNMPNSDMPSKAPKLSHSEKSSPRTCLPSLPLPSITNDISAAAPPLCLAYDHYLRLPELRKLWNSREFPNWNNESILKPALHALEITFRFLSTVLSDPRPYANHREWNRIIESIATRQIEIIAMLCEDEENNPETRGTTPTAYLSSGNSNIRSYSETSLLPRLATWYKSKDVAQRILLSVECQMMRCTYTLGLGEPNLAGKPTLRYDDVCKPNEIHALKTTPYDDRIENYENHAVHATHQIVESWIHASRKLLERIGESINGRRFEKAAEDCYTVERIWKLLTEVEDVHLMMDPGDFLKLKNQLSMKSSCYETASFCMRSKELVEVTKMCRDLRHRVPEILDVEVDPKGGPRIQEAAMKLYVMEKISGFEKVHLLQAMQGIEVAMKRFFYAYKQVLAVVMGSSEANGNRVGLSCDGGDSLTHMFLEPTYFPSLDAAKTFLGYFWDNDNKWV 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00129 458 Gene3D - 210 446 - -
Car06g00129 458 Pfam Hs1pro-1 protein C-terminus 191 453 IPR009743 -
Car06g00129 458 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 456 - -
Car06g00129 458 MobiDBLite consensus disorder prediction 11 31 - -
Car06g00129 458 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 456 IPR038759 -
Car06g00129 458 Pfam Hs1pro-1 N-terminus 1 188 IPR009869 GO:0006952
Car06g00129 458 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 213 447 IPR037217 GO:0019441|GO:0020037|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00129 Car-Chr6 1590028 1592208 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00129 - - gmx:547603 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00129 06 1590028 1592208 Car02g01685 02 45824134 45826032 PCT