Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01685 ATGGTTGATTTAGAATGGAAACAAAATATGCTAAACTCAAAAAATATATCTCCCAAATCACCCAAACTCTCTTTACCCTTTCCCACTTTAAAGCTTCCACTTCCACTTTTACCAAACGACATCTCTACAGCGTCGTCCACACTTTGCACCTTATACGACAACTACCTCCGCCTCCCTCACCTCAAAACCCTTTGGGCCTCCAACAACTTCCCTAATTGGGCCAACGAGCCCATCATAAAACCCGCTTTACACGCTCTCGAAATCACTTTCCGATTAATCTCAACCGTTTCATCAGACCCAAGACCCTACGTCAACAAACGCGAATGGGCCCGACGGGCCGAATCACTCGCCAAAGCCCAAATCCAACTCATCTCCATACTCTGCGAAGACGAAGAACATAACCCAAACTCACGTGGCAATGCTCCTGTGACTGACGTCAGCAATATAAGCCAAATCAGAAGCTATAGCGAACAAAGCTTGCTCCCAAAACTCGCCACGTGGCAGAAATCAAAGGATATAGCACAGAGAATCCTTTCCACCGTGGAATACGAAATGATGAGGTGTCCTTACACGTTAGGTTTAGGAGAACCGAATTTTAACGGAAAGAAAATTCTCCGTTACGACGACGTTTGCAAACCGAATTTGTTACACTCGCTAGAAACAACGCCGTTCGATCACGTCGGGAACTACGAAAACAGAACGCTACACGCGACGCACCAGATTATGGAATCGTGGACACGCGCCGCGCGCGTGTTGATGGATCGAGTGAACGAAGCGATTGACGGTAAAAGATTCGAGAAAGCCGCGAGTGAATTACACGCGGTGGAGAAGATCTGGAAGGTTCTAATAGAGATCGAAGATATGCATTTGATGATGGATCCGGAGGATTTTCTGAAACTGAAGAAACAATTAGGGATTCGAAAATGGAACGAAACGGTGCCGTTTTGTTTCCGTTCGAAGGAGTTGGTGGAGATAATGAAGATGAGGAAGGTGCCGGAGATATTGGAAGTGGAGGTGGACCCCACAGGTGGGCCCGGAGTGATGGAAGAAGCGATGAAGGTTTATTTGGAGAAGAAGAGTGAGAAGGTTCATGTGTTGCAAGCGATGCAGGGGATTGAGTTGGTGATGAAGAGATTTTTCTTTGCGTATAAACAGGTTGTGACGGTTATGATGGGAACTACTGAGTCAAATTCGGAATCGTTGAGTCAGATATTTTTTGAACCTACTTCTTTTCCTAGCTTGGATGCTGCTAAGACTTTTCTTGGCTATTATTTGGAAAATTATGAAAATACAATTCATTGGTGGAAATTTGTGGAGGAGGATATGGACACACCTTATGGTTTGAGATATAAGCACAATAGAAGTTATTATTGA 1374 0.4469 MVDLEWKQNMLNSKNISPKSPKLSLPFPTLKLPLPLLPNDISTASSTLCTLYDNYLRLPHLKTLWASNNFPNWANEPIIKPALHALEITFRLISTVSSDPRPYVNKREWARRAESLAKAQIQLISILCEDEEHNPNSRGNAPVTDVSNISQIRSYSEQSLLPKLATWQKSKDIAQRILSTVEYEMMRCPYTLGLGEPNFNGKKILRYDDVCKPNLLHSLETTPFDHVGNYENRTLHATHQIMESWTRAARVLMDRVNEAIDGKRFEKAASELHAVEKIWKVLIEIEDMHLMMDPEDFLKLKKQLGIRKWNETVPFCFRSKELVEIMKMRKVPEILEVEVDPTGGPGVMEEAMKVYLEKKSEKVHVLQAMQGIELVMKRFFFAYKQVVTVMMGTTESNSESLSQIFFEPTSFPSLDAAKTFLGYYLENYENTIHWWKFVEEDMDTPYGLRYKHNRSYY 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01685 457 Gene3D - 205 307 - -
Car02g01685 457 PANTHER NEMATODE RESISTANCE HSPRO2-LIKE PROTEIN 1 432 - -
Car02g01685 457 Pfam Hs1pro-1 protein C-terminus 185 426 IPR009743 -
Car02g01685 457 Pfam Hs1pro-1 N-terminus 1 182 IPR009869 GO:0006952
Car02g01685 457 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 207 421 IPR037217 GO:0019441|GO:0020037|GO:0046872
Car02g01685 457 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 432 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01685 Car-Chr2 45824134 45826032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01685 - - gmx:100174967 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01685 02 45824134 45826032 Car02g01685 02 45824134 45826032 ECH
Car06g00129 06 1590028 1592208 Car02g01685 02 45824134 45826032 PCT