Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00119 ATGACGGAAGATCGGAGCGTGAAAACCAACCGCGTCGTTGACGTGGTATTAGACTGTGTAATACCGTACATCGACGATCCTAAAGACCGTGACGCCGTTTCTCAAGTATGCCGGCGATGGTACGAACTTGATTCGTTGACTAGGAAACACGTGACGATTGCTCTGTGCTACACCACGACGCCGTCGCGTCTCCGTCGTAGATTCCCTCACCTGGAGTCTCTGAAACTGAAGGGGAAACCTAGAGCGGCGATGTTCAATTTGATTCCTGAAGATTGGGGAGGACACGTGACACCTTGGATTAAAGAGATTTCTCATTATTTTGATTGTCTCAAGAGTCTTCACTTTCGACGAATGATTATTCAAGATTCCGATCTTAAGCTCCTTGCTCGCTCACGTGGTCACGTGCTTCAATCTCTTAAGCTTGATAAGTGTTCTGGTTTTTCCACTCATGGACTTCGCTTTATTGGTCGCTTTTGCAGGAGTTTAAAAGTTTTGCTTTTGGAGGAAAGCACAATTGTTGAGAACGATGGCAATTGGCTGCATGAGCTTGCTTTGAATAATACAGTTCTTGAGTTTCTAAATTTTTACTTGACAGATATTGTTGATGTCAAAGTTCAAGACCTTGAGCTTTTAGCCAAAAATTGCCCCAACTTGGTGTCTGTGAAAATTACTGACTGTGAAATCTTGGATCTTGTGAACTTTTTCCGCAACGCAACTGCTCTAGAAGAGTTTTGTGGAGGCACGTACAATGAGGAACCTGAAAGATACTCTTCTGTATCTTTACCAGCAAAGCTATGCCGATTGGGTCTAACATATATTGGGAAGAATGAGTTGCCAATAGTATTCATGTATGCAGCTGCACTGAAAAAATTGGATCTCCTCTATGCCATGCTAGATACAGAGGATCATTGTATGTTGTTCCAAAAATGCCCAAATTTGGAAGTCCTTGAGACAAGGAATGTAATTGGAGATAGAGGATTAGAAGTTCTTGGTCACTGTTGTAAGAGGTTAAAAAGACTTAGGATTGAGCGAGGTGATGATGATCAAGGAATGGAGGATGAAGAAGGTACTGTTTCCCACAGAGGACTCATTGCTTTATCACAGGGATGTACAGAGCTTGAATATTTGGCTGTTTACGTTTCCGATATTACAAATGCATCTTTGGAACAAATTGGCACTCACTTGAAGAACCTTTGCGATTTTCGCCTTGTCTTGCTTGATCATGAAGAGAAAATATCAGATTTACCACTTGACAACGGTGTTCGGGCTTTACTGAGGGGCTGTGACAAGCTTAAAAGATTTGCACTATATCTGCGGCGTGGGGGCTTGACTGATATTGGTCTTGGTTACATTGGGCAATACAGTCAAAATGTGAGGTGGATGCTACTGGGATACGTGGGGGAAACTGATGCAGGCCTTTTGGAGTTTGCAAAGGGATGTCCTAGTCTTCAGAAACTCGAAATGAGAGGGTGTTCCTTTTTCAGTGAGCATGCACTTGCTGTTGCTGCAACACAATTGACTTCTCTTAGGTACTTGTGGGTTCAAGGGTATGGTGCATCTCCATCTGGACGTGATCTTTTGGCAATGGCTCGCCCCTTTTGGAATATTGAGTTAATTCCTTCTAGACAAGTTGCCATCAGCAATAATATGGGTGAGCCCCTGGTTGTTGTTGAGCATCCAGCTCATATTCTTGCATACTACTCTCTTGCTGGCCAAAGATCAGATTTTCCAGATACCGTTGTACCTTTGAACCCTGCAACATATGTTAATGCCTACAGTTGTGTATAA 1788 0.4306 MTEDRSVKTNRVVDVVLDCVIPYIDDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPSRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWIKEISHYFDCLKSLHFRRMIIQDSDLKLLARSRGHVLQSLKLDKCSGFSTHGLRFIGRFCRSLKVLLLEESTIVENDGNWLHELALNNTVLEFLNFYLTDIVDVKVQDLELLAKNCPNLVSVKITDCEILDLVNFFRNATALEEFCGGTYNEEPERYSSVSLPAKLCRLGLTYIGKNELPIVFMYAAALKKLDLLYAMLDTEDHCMLFQKCPNLEVLETRNVIGDRGLEVLGHCCKRLKRLRIERGDDDQGMEDEEGTVSHRGLIALSQGCTELEYLAVYVSDITNASLEQIGTHLKNLCDFRLVLLDHEEKISDLPLDNGVRALLRGCDKLKRFALYLRRGGLTDIGLGYIGQYSQNVRWMLLGYVGETDAGLLEFAKGCPSLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPSGRDLLAMARPFWNIELIPSRQVAISNNMGEPLVVVEHPAHILAYYSLAGQRSDFPDTVVPLNPATYVNAYSCV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00119 595 SUPERFAMILY RNI-like 87 399 - -
Car06g00119 595 SMART LRR_CC_2 370 394 IPR006553 -
Car06g00119 595 SMART LRR_CC_2 480 504 IPR006553 -
Car06g00119 595 SMART LRR_CC_2 133 158 IPR006553 -
Car06g00119 595 SMART LRR_CC_2 428 454 IPR006553 -
Car06g00119 595 Pfam F-box 11 50 IPR041567 -
Car06g00119 595 Gene3D - 2 48 - -
Car06g00119 595 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 10 586 - -
Car06g00119 595 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 10 586 - -
Car06g00119 595 Pfam Transport inhibitor response 1 protein domain 69 115 IPR041101 -
Car06g00119 595 Gene3D Ribonuclease Inhibitor 49 587 IPR032675 -
Car06g00119 595 SUPERFAMILY RNI-like 362 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00119 Car-Chr6 1485020 1488774 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00119 K13463 - gmx:732662 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00119 06 1485020 1488774 Car02g01673 02 45693105 45698442 PCT