Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01673 ATGGAGGAAAAAGCCGCGTGCGGCGGCGTTGGTAGGACGAGCACGAAACTTTCCGACGTGGTTCTCGACTGCGTGATGCCGTACATCCACGACCCGAAAGACAGGGACGCGGTGTCTCAGGTGTGTCGGAGATGGTACGAGCTTGATTCGTTGACGAGGAAGCACGTGACGATTGCGTTGTGTTACACAACGACGCCGGATAGACTCCGGCGAAGGTTTCCTCACTTGGAGTCGTTGAAGTTGAAAGGGAAACCTAGGGCGGCGATGTTTAACTTGATACCGGAGAATTGGGGAGGGTTTGTTACTCCTTGGGTGAAAGAGATTTCCAAGTATTTTGATTGTTTGAAATCGTTGCACTTTCGTCGTATGATTGTAGCTGATTCTGATCTTCAGATTCTTGCTCGTTCGCGATGTAATAGTCTTCATGCTCTTAAGTTAGAGAAGTGTTCTGGATTCTCCACTGATGGACTTTACTATGTTGGTCGCTTTTGCAAGAATTTAAGAGTCTTGTTTATGGAGGAAAGCTCAGTTGTCGAGAAAGATGGTGAATGGCTGCATGTGCTTGCTTTAAATAATACAGTTCTTGAGACACTTAATTTTTACTTGACTGATATTGCCAATGTCAGAATTCAGGACCTCGAACTTATAGCAAAAAATTGTCCCAACTTAGTCTCTGTGAAAATTACTGATTGTGAAATCTTGAATCTGATGAACTTCTTCCGATATGCATCTTCTCTAGAAGAATTTTGTGGAGGTTCCTACAATGAAGATCCAGAAAAGTACTCTGCTATATCATTACCAGCAAAGTTAAGTCGTTTGGGTTTGACGTATATTGGAAAGAATGAAATGCCGTTTGTGTTCCCTTATGCAGCAATGCTAAAAAAATTGGATCTTCTCTATGCAATGCTAGATACGGAGGATCATTGTACATTAATCCAGAAATGCCCCAACTTGGAAGTCCTTGAGTCAAGGAATGTAATCGGAGACAGAGGATTAGAAGTTCTTGCTAGCTGTTGTAAGAAGCTGAGAAGGCTAAGGATTGAAAGAGGCGATGACGATCAAGGAATGGAAGACGAAGAAGGCATTGTTTCCCAGAGAGGACTAATTGCCTTATCACAAGGCTGTCCAGAGCTTGAATACATGGCTGTTTATGTATCAGACATCACAAACGCATCTCTGGAACACATCGGTACTCACTTGAAAAACCTTTGCGATTTTCGCCTCGTCTTGCTTGACCGTGAGGAGAAGATAAGTGATTTGCCACTTGACAATGGGGTGAGGGCATTACTGAGAGGTTGTGACAAACTTAGAAGATTTGCCCTTTATCTCAGACCTGGAGGCATAACTGATGTCGGCCTAGGTTACATCGGACAATACAGTCCAAACGTGAGATGGATGCTACTCGGTTACGTCGGCGAAACCGATGCAGGACTGTTGGAATTCTCCAAAGGTTGTCCAAGTCTTCAGAAACTTGAAATGAGAGGGTGCTCATTTTTCAGCGAGTATGCACTAGCTATTGCTGCAACTAGGCTAACATCTTTGAGGTATCTATGGGTACAAGGGTATGGAGCATCACCATCTGGACGTGATCTTTTGGCAATGGCTAGACCATATTGGAACATTGAGTTGATTCCTTCTAGACGTGTGGTTGTTAAGAATCAACAAGATGAACTTGTTGCTGTTGAACATCCAGCTCATATTCTTGCTTATTACTCACTTGCTGGTCCAAGATCAGATTTTCCTGATACTGTTATACCTTTGGATCCTGCGGCATAttattaa 1782 0.4338 MEEKAACGGVGRTSTKLSDVVLDCVMPYIHDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPDRLRRRFPHLESLKLKGKPRAAMFNLIPENWGGFVTPWVKEISKYFDCLKSLHFRRMIVADSDLQILARSRCNSLHALKLEKCSGFSTDGLYYVGRFCKNLRVLFMEESSVVEKDGEWLHVLALNNTVLETLNFYLTDIANVRIQDLELIAKNCPNLVSVKITDCEILNLMNFFRYASSLEEFCGGSYNEDPEKYSAISLPAKLSRLGLTYIGKNEMPFVFPYAAMLKKLDLLYAMLDTEDHCTLIQKCPNLEVLESRNVIGDRGLEVLASCCKKLRRLRIERGDDDQGMEDEEGIVSQRGLIALSQGCPELEYMAVYVSDITNASLEHIGTHLKNLCDFRLVLLDREEKISDLPLDNGVRALLRGCDKLRRFALYLRPGGITDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQKLEMRGCSFFSEYALAIAATRLTSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRVVVKNQQDELVAVEHPAHILAYYSLAGPRSDFPDTVIPLDPAAYY 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01673 593 Gene3D - 10 53 - -
Car02g01673 593 SUPERFAMILY RNI-like 86 533 - -
Car02g01673 593 Pfam Transport inhibitor response 1 protein domain 74 120 IPR041101 -
Car02g01673 593 Pfam F-box 15 55 IPR041567 -
Car02g01673 593 SUPERFAMILY L domain-like 189 321 - -
Car02g01673 593 SMART LRR_CC_2 138 163 IPR006553 -
Car02g01673 593 SMART LRR_CC_2 375 399 IPR006553 -
Car02g01673 593 SMART LRR_CC_2 315 338 IPR006553 -
Car02g01673 593 SMART LRR_CC_2 485 510 IPR006553 -
Car02g01673 593 SMART LRR_CC_2 433 459 IPR006553 -
Car02g01673 593 PANTHER BNAA03G56600D PROTEIN 13 585 - -
Car02g01673 593 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 13 585 - -
Car02g01673 593 Gene3D Ribonuclease Inhibitor 54 591 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01673 Car-Chr2 45693105 45698442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01673 K13463 - gmx:100793081 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01673 02 45693105 45698442 Car02g01673 02 45693105 45698442 ECH
Car06g00119 06 1485020 1488774 Car02g01673 02 45693105 45698442 PCT