Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00045 ATGGCTGTGCATTTTCTTCTCCTTCTTTTTGCAGTGTTTATTGTTGCAGCGGATGAAGAACCATTTATTGGGGTGAACATTGGTACAGATCTCTCAGATATGCCACACCCTACTCAAGTAGTTGCATTGCTTAAATCTCAACAAATTCGACATATTCGATTGTATAATGCAGACCTAGCAATGCTCACTGCACTGTCAAAATCAGGAATTCAAGTTGTTATCTCAGTCCCTAATGATGAACTCTTATCAATTGGTCAATCAAATTCCACAGCTACAAAATGGGTTCACAACAATGTGTTAGCATATTATCCATCCACAAACATCACAGCAATTTGTGTTGGTTCTGAGGTTTTAACTACACTCCCTAATGCAGCAAAACTTCTAGTCAATGCTCTTAACTACATACATTCAGCCCTTGTAGCTTTGAAACTCGATCGCCAGATCAAAGTCTCCACGCCTCTTCCTTCGACCGTCATACTCGATTCATTTCCACCTTCTCAAGCCTTTTTTAACAGTTCATTGAATCAAGTCATTATTCCAATACTTGAATTTTTGCAATCTACAAACTCTTATCTCATGCTTAACATTTATCCTTACTATGACTACATGGAATCAAATGGTGCTATCCCTTTGGATTATGCACTCTTCAAACCACTTCCACCAAAGAAAGAATCCATTGATTCTAACACACTTCTTCACTACTCCAATGTGTTCGATGCTGTCGTCGATGCAGCGTACTTCGCAATGTCATATCTTAATTACACTAACATTCCATTGGTAGTGACAGAAACGGGTTGGCCTTCAAAAGGTAGTTCTAACGAGCCCGATGCCACGCCAGACAATGCTAATACATACAACAGCAATTTGATCAAGCATGTGTTGAACAGAACCGGAACGCCTAAGCATCCTGGAATTTCTGTTAGTACTTATATCTATGAGCTTTACAATGAGGACACAAAGCCGGGGATATTGTCGGAGAAAAACTGGGGACTTTTTGAATCGAACGGCATACCAGTTTATGTTTTGCAGTTGACAGGATCAGGTGCAGTGTTGGCAAATGATACAAGCAATGAAACTTTTTGCATTGCTAAAGATGGTGCTGATCCAAAGATGTTGCAGGCTGGTATAGATTGGGCTTGTGGGCCTGGAAAAGTGGATTGTTCTCCATTGTTGCAGGGAGAAACTTGTTATGAACCAGATAATGTTGTTGCACATGCTAATTATGCTTTTGACACTTATTATCATATGATGGGAAAGTCTACTGAATCTTGTGATTTTAATGAAATGGCTATAATCTCCACTTCAGATCCAAGTCATGGTTCTTGTATATTTGCAGGAAGACTTGGAAGAAATGGCACCTTCTCTAATGTCACTGCACCATCACTGAATTCCTCAGACTCAAATTCTTTTGCATGCAATCTTCTCAGATGTGAATTGAGAATTAGAAGTCTTCTAATTGTGATAGGACTTTTAATATGGGGAGTGATTTTGCCATAA 1497 0.3928 MAVHFLLLLFAVFIVAADEEPFIGVNIGTDLSDMPHPTQVVALLKSQQIRHIRLYNADLAMLTALSKSGIQVVISVPNDELLSIGQSNSTATKWVHNNVLAYYPSTNITAICVGSEVLTTLPNAAKLLVNALNYIHSALVALKLDRQIKVSTPLPSTVILDSFPPSQAFFNSSLNQVIIPILEFLQSTNSYLMLNIYPYYDYMESNGAIPLDYALFKPLPPKKESIDSNTLLHYSNVFDAVVDAAYFAMSYLNYTNIPLVVTETGWPSKGSSNEPDATPDNANTYNSNLIKHVLNRTGTPKHPGISVSTYIYELYNEDTKPGILSEKNWGLFESNGIPVYVLQLTGSGAVLANDTSNETFCIAKDGADPKMLQAGIDWACGPGKVDCSPLLQGETCYEPDNVVAHANYAFDTYYHMMGKSTESCDFNEMAIISTSDPSHGSCIFAGRLGRNGTFSNVTAPSLNSSDSNSFACNLLRCELRIRSLLIVIGLLIWGVILP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00045 498 SMART X8_cls 359 444 IPR012946 -
Car06g00045 498 Gene3D - 353 446 - -
Car06g00045 498 Pfam X8 domain 360 430 IPR012946 -
Car06g00045 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 257 270 IPR000490 GO:0004553|GO:0005975
Car06g00045 498 Gene3D Glycosidases 22 348 - -
Car06g00045 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 483 IPR044965 GO:0004553|GO:0005975
Car06g00045 498 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Car06g00045 498 Pfam Glycosyl hydrolases family 17 23 343 IPR000490 GO:0004553|GO:0005975
Car06g00045 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 6 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00045 Car-Chr6 595138 598046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00045 17 496 Glycoside Hydrolase AT1G66250 69.087 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g00045 K19891 - gmx:100799965 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00045 06 595138 598046 Car06g00045 06 595138 598046 ECH
Car06g00045 06 595138 598046 Car02g01538 02 43078910 43082278 PCT