Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01538 ATGGCTTTGATGCATTTTCTTCTTCTGCTTTTTGCAGTCTCTATTGTTTCAGCTGATGAAGAACCTTTTATTGGAGTGAACATTGGAACAGAACTATCTGATATGCCACACCCTACTCAAGTAGTTGCGCTGCTCAAAGCGCAACAAATTCGACACGTTCGATTGTATGATGCTGACCAAGCTATGCTCATTGCACTTGCAAAATCCGGCATTCAGGTTGTTATAACCGTCCCTAACGAAGAACTCTTAGCAATCGGTCAATCGAATGCCTCAGCTGCCAACTGGGTTTCCCGCAATGTGGTTGCACATTATCCGGCCACCAATATCACTGCCATTTGTGTTGGTTCCGAGGTTTTAACCACACTTCCTAATGTTGCAAAAGTTCTTGTCAACGCGATCAAGTACATTCATTCAGCCCTTGTTGCGTCAAATCTTGATCGCCAAGTTAAAGTTTCAACACCACTTTCTTCATCAATCATCCTTGATTCGTTTCCTCCTTCTCAGGCTTTCTTTAACCGATCGCTGAATTCGGTTTTAGTTCCGATCCTTGATTTCCTGCAATCCACCGACTCTTATCTCATGCTCAATATTTACCCTTACTATGATTACATGCAATCAAATGGTGTGATTCCATTAGATTATGCACTTTTCAAACCTCTCCCTCCAAACAAAGAAGCTGTTGATTCCAATACCCTTCTCCATTACTCCAATGTCTTTGATGCCATGGTTGATGCGGCATACTTCGCCATGGCTTTTCTAAATTACACCAACATTCCTGTAGTTGTAACCGAATCAGGCTGGCCTTCAAAAGGTGGCTCAAACGAGCCCGACGCAACAATCGACAATGCCAACAATTACAACAGCAATTTGATCAAGCACGTGTTTAACAAAACTGGAACACCGAAACATCCAGGAACTGCTGTTAGTACTTACATATATGAACTCTACAATGAGGATACGAAACCGGGAGTATTGTCTGAAAAAAACTGGGGATTGTTTGATGCGAACGGAGTGCCTATTTACATTCTACACTTGACAGGATCGGGAGCGGTTTTGGCGAACGACACAAGCAATCAAACTTTCTGCGTTGCAAAGGATGGCGCAGATCCGAAGATGATACAGGCTGCGTTGGATTGGGCGTGCGGACCTGGAAAAGTGGAGTGCGATCTATTGTTGCAAGGACAACCGTGTTATGAACCGGACAATGTGATTGCACATGCTAATTATGCTTTTGATAGTTACTATCATAAAATGGGGAACACTCCTGATTCATGTGACTTCAAGGGTGTTGCTACAATCACCACTTCAGATCCAAGTCATGGTTCTTGTATATTTCCTGGAAGTCTTGGAAAAAATAGCACCTTTGGAAACTTCACAGCACCATCAATGAATTCATCAAGTGATTCTTCAGCCTACAGTATCCACAGCATTGAAATGAGAATTTGTAGCCTTGTAATGGTGACAGGATTTCTAATACTGGGAGTGGTTTTGATTTAG 1497 0.4255 MALMHFLLLLFAVSIVSADEEPFIGVNIGTELSDMPHPTQVVALLKAQQIRHVRLYDADQAMLIALAKSGIQVVITVPNEELLAIGQSNASAANWVSRNVVAHYPATNITAICVGSEVLTTLPNVAKVLVNAIKYIHSALVASNLDRQVKVSTPLSSSIILDSFPPSQAFFNRSLNSVLVPILDFLQSTDSYLMLNIYPYYDYMQSNGVIPLDYALFKPLPPNKEAVDSNTLLHYSNVFDAMVDAAYFAMAFLNYTNIPVVVTESGWPSKGGSNEPDATIDNANNYNSNLIKHVFNKTGTPKHPGTAVSTYIYELYNEDTKPGVLSEKNWGLFDANGVPIYILHLTGSGAVLANDTSNQTFCVAKDGADPKMIQAALDWACGPGKVECDLLLQGQPCYEPDNVIAHANYAFDSYYHKMGNTPDSCDFKGVATITTSDPSHGSCIFPGSLGKNSTFGNFTAPSMNSSSDSSAYSIHSIEMRICSLVMVTGFLILGVVLI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01538 498 Gene3D Glycosidases 23 349 - -
Car02g01538 498 SUPERFAMILY (Trans)glycosidases 24 343 IPR017853 -
Car02g01538 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 2 7 482 - -
Car02g01538 498 Pfam X8 domain 361 432 IPR012946 -
Car02g01538 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 482 IPR044965 GO:0004553|GO:0005975
Car02g01538 498 SMART X8_cls 360 445 IPR012946 -
Car02g01538 498 Pfam Glycosyl hydrolases family 17 24 343 IPR000490 GO:0004553|GO:0005975
Car02g01538 498 Gene3D - 354 446 - -
Car02g01538 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01538 Car-Chr2 43078910 43082278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01538 18 498 Glycoside Hydrolase AT1G66250 71.636 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01538 K19891 - gmx:100792634 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00045 06 595138 598046 Car02g01538 02 43078910 43082278 PCT