Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03085 ATGGTGAATCCATTGGTTGAACGTGCCACCAGCGACATGCTTATTGGTCCTGATTGGGCTTTGAACATCGAGATCTGTGACATACTCAATCGTGACCCTGGGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAGAAATTCTAAAACTCAACTTCTTGCACTAACTCTGCTGGAGACGATCGTGAAGAATTGTGGGGACATTGTCCACATGCATGTTGCGGAGAGAGATGTTCCTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCTGATGGTCATGTCAGAGAGAAGATACTGATTCTTATTGATACTTGGCAAGAAGCTTTTGGAGGCCCAAGGGCAAGATATCCACAGTATTATGCTGCCTACCAGGAACTATTGcattctggggctgtattccctcaaaggtctgagcattctgCACCTGTATTCACGCCACTACAAACACAACCATTGGCATCATACCCTCAAAATATACGCGACGCTGACGCAAGGCACAACTCAGCTGAGCCATCAGTGGAGTCTGAGTTTCCAACCCTAAGTTTGACTGAAATTCAGAATGCACGCGGTATTATGGATGTTCTTACAGAAATGCTCACTGCTTTAGAGCCTGCTAACAAAGAAGGGCTTAGACAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTAGAACATACAAGCAAAGAGTGGTACACCTTGTTAACTCAACTTCGGATGAGTCACTGTTATGTCAAGGACTAGCTCTTAATGATGATTTGCAGCGTGTACTGGCCAAGCATGAATCCATTGCTTCGGGAGCTTCTGTTCAAAATCAGAATGAGAAATCAAATCCTGCACCTACTGAAGCACTTGTAGATGTTGATGCTCCTTTGATTGATACTGGAGATACTAGTAAACAAACTGATGCGAGATCACCTTCTAGTGCTGAAGCAGGATCTCAAACATTGAATCAGTTGTTGCTTCCTGCACCCTCTACATCAAATGCTTCAGCTCCTCCTGTGAAAATTAACCCCAAATTGGATCTGCTCAGTGGTGAAGATTATGACTCACCAAAAGCAGATAATTCACTTGCTCTTGTTCCTGTGGGAGAACAACAGCCAGCCAGTCCTATGTCTCAACAGAATGCCATTGTTCTTTTTGATATGTTTTCCAATGGAAATAATGTGCCGGGTTCTGTTAATACCCAGCCAATAGCTCCCCAATTTCAACAACAACAAACTTTCATATCTCAAGGTGTATTTTACCCCAACGGAAGTGTGCCAAATATGGGGTCACCTCGGTATGAGCAATCACTATATGCACAAAGCACAGGTCCTGCCTGGAATGGTCAGGTTGTGCAGCAGCAGCAGCCACCTTCACCAGTTTATGGTGCACAAAGTGGTGGGTCATTGCCGCCTCCTCCTTGGGAAACTCAATCGGCCAACAGTGGTAGTCCAGTAGCAGGCAGTCAATACCCACAACCACTGCAACTCACTCAAATGGTCATGACACATGTACAAACTGCCGCACTTCCTCAGGGACCTCAAGCAACAGGGTATGACCAGGCTGCTGGAATGTATATGCAACCAAATGCTGGCCATATTTCTACAATCAATAACCAGGCTCAAAGTAACCAATTGAGCTTGCAGCCTCAGTATATTCAGGGCGTTGCAGGTCCTTATATGGGTATGGTTCCACCTCAAATGCAAAATGGTCCTGTGGCTTCTGTGTATCCTCAACACATGTATGGTAACCAATACATGGGAGGATATGGCTATGGTcagcagcaacagcagcaacaacaacaagggctacaATATGTGGAGCAGCAAATGTATGGTTTATCTGTGAGAGATGATAATGCTCTAAGAAATTCTTACCAGGTTTCTGGTGCATCTTATGCGCCATCCGGGAAGCCTTCGAAGCCAGAGGATAAGTTATTTGGGGACCTTGTTGACATGGCAAAAGTGAAGCCAAAATCTACTCCAGGCCCAAGCTGA 1989 0.4309 MVNPLVERATSDMLIGPDWALNIEICDILNRDPGQAKDVVKGIKKRIGSRNSKTQLLALTLLETIVKNCGDIVHMHVAERDVPHEMVKIVKKKPDGHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLHSGAVFPQRSEHSAPVFTPLQTQPLASYPQNIRDADARHNSAEPSVESEFPTLSLTEIQNARGIMDVLTEMLTALEPANKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESIASGASVQNQNEKSNPAPTEALVDVDAPLIDTGDTSKQTDARSPSSAEAGSQTLNQLLLPAPSTSNASAPPVKINPKLDLLSGEDYDSPKADNSLALVPVGEQQPASPMSQQNAIVLFDMFSNGNNVPGSVNTQPIAPQFQQQQTFISQGVFYPNGSVPNMGSPRYEQSLYAQSTGPAWNGQVVQQQQPPSPVYGAQSGGSLPPPPWETQSANSGSPVAGSQYPQPLQLTQMVMTHVQTAALPQGPQATGYDQAAGMYMQPNAGHISTINNQAQSNQLSLQPQYIQGVAGPYMGMVPPQMQNGPVASVYPQHMYGNQYMGGYGYGQQQQQQQQQGLQYVEQQMYGLSVRDDNALRNSYQVSGASYAPSGKPSKPEDKLFGDLVDMAKVKPKSTPGPS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03085 662 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Car05g03085 662 MobiDBLite consensus disorder prediction 447 488 - -
Car05g03085 662 PANTHER TARGET OF MYB PROTEIN 1-LIKE ISOFORM X1 1 658 - -
Car05g03085 662 MobiDBLite consensus disorder prediction 270 289 - -
Car05g03085 662 Gene3D - 183 276 IPR038425 -
Car05g03085 662 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Car05g03085 662 MobiDBLite consensus disorder prediction 468 488 - -
Car05g03085 662 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Car05g03085 662 MobiDBLite consensus disorder prediction 297 315 - -
Car05g03085 662 CDD GAT_GGA_like_plant 188 266 - -
Car05g03085 662 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Car05g03085 662 Gene3D - 1 138 IPR008942 -
Car05g03085 662 CDD VHS 2 130 - -
Car05g03085 662 Pfam VHS domain 4 123 IPR002014 GO:0035091|GO:0043130
Car05g03085 662 MobiDBLite consensus disorder prediction 295 315 - -
Car05g03085 662 PANTHER TOM1-LIKE PROTEIN 1 658 IPR044836 GO:0035091|GO:0043130|GO:0043328
Car05g03085 662 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Car05g03085 662 SUPERFAMILY GAT-like domain 142 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03085 Car-Chr5 75638815 75645646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03085 - - gmx:100805762 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03085 05 75638815 75645646 Car05g03085 05 75638815 75645646 ECH
Car05g03085 05 75638815 75645646 Car04g03001 04 57769446 57780550 PCT