Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03001 ATGGTGAATTCCATGGTTGAACGCGCCACCAGCGACATGCTCATCGGTCCCGATTGGGCTATGAATATCGAGATCTGTGACATGCTCAATCATGACCCTGGGCAAGCAAAGGAAGTTGTCAAAGGTATAAAGAAACGGATTGGAAGTAGAAATTCTAAAGTTCAACTCCTTGCACTAACTTTGCTGGAGACAATCATAAAGAACTGCGGAGATATTGTTCACATGCATGTTGCAGAGAGAGATGTGCTTCATGAGATGGTGAAAATAGTGAAGAAAAAGCCTGATTTTCATGTCAAAGAGAAGATACTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGACCGAGGGCAAGATATCCACAATACTATGCTGCATACCAGGAACTGTTGCGTGCTGGTGCAGTATTCCCTCAAAGATCTGAACAGTCTGCACCCGTATTCACTCCTCCACAAACACAACCATTGGCTTCATACCCTCCAAACATACGAGATTTGGATGCTAGACAGGACACGGCTGAGTCCTCTGCAGAGTCTGAGTTTCCAACACTAAGTTTGACCGAAATTCAGAATGCACATGGTATTATGGACGTTCTTGCAGAAATGCTCAATGCAATAGATCCTAGTAACAAAGAAGGGCTTAGACAGGAGGTTATTGTTGATTTGGTGGAGCAGTGTAGAACATACAAGCAAAGAGTGGTACACCTTGTAAACTCAACTACGGATGAATCACTGCTATGCCAGGGACTGGCTCTCAATGATGATCTGCAGCGTGTACTTGCCAGACATGAATCTATTTTGTCTGGAACTTCTACTCAAAATGGAAATCACGTCGAGAATTCAAAACCTGCATCTGCTGGGCAACTTGTAGATATTGATGCTCCTTTGGTTGATACTGGAGATACTGGCAAACAAACTGACGGGAGATCTTCTTCTGGTGCTGAAACAGGGTCCCAAACATTGAATCAGTTATTGCTTCCCGCGCCCGCAGCTTCATCCAACGGTTCAGCTGTACCTGCCAAAGTTGATCCCAAGTTGGACCTGCTCAGTGGTGATAACTACAACTCACCAAAAGCTGATACTTCACTTGCTCTTGTTCCTCTGGGAGAACCACATCCTGCTAGTCCTGTGTCTGATCAGAATTCCCTTGTTCTTTTTGATATGTTTTCTAATGGAGACACTGCACCGAAGTCTGTCAATACCCAGCAAACTAATGTTGCTGGTCAGTCTGGCCCATTTACTCCCCAGTTTCAACAACAGCAGACATTCATATCTCAAGGTGGATTTTACCCCAATGGAAATGTGCCAAATGCTGGTTCACCTCAGTATGAACAATCACTGCATACACAAAATACAGGTCCTGCCTGGAATGGTCAGGTTGCCGAACAGCAACAGCCAGCTTCCCCTTATGGTGCGCAAAATAGCGGATCATTGCCACCACCTCCTTGGGAAGCTCAACCAGTAGACAATGGCAGTCCGATAGCAGGCGCTCAGTATCCACAACCACCACAAGCCAGTCATATGGTTATGACACATGCTCAGGGTGCTGCAAATCATCAAGGGCCTCAAGCAATGGGTTATGACCAGGGTGCTGGTATGTATATGCAGCCACATGCTAACCATGCTGGTAGCAATCAATTAGGTATGCATCCTCAGCATATTCAAGGTGTTGCAGGGCCATACATGGGTATGGCTTCACATCAAACGCAAGGTGGTCCTGCGGTTTCCATGTATCCACAACAGATGTATGGAAACCAATATGCAGGTTATGGCTACGGTCAGCAGCAACCCGGAGTTCCATACATTGAGCAGCAAATGTATGGTATGACTGTTAGAGATGATAGTTATTTGCGAAACTCTAACCAGGTCCCTATGTCTTATGTTCCATCGGGGAAGCCTTCAAAGCCAGAGGATAAGTTATTTGGGGACCTTGTGGACATGGCAAAAGTGAAGCCAAAACCGACTCCAGGTCGAGCTGGTAGCATGTAA 1989 0.4565 MVNSMVERATSDMLIGPDWAMNIEICDMLNHDPGQAKEVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIVKKKPDFHVKEKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLASYPPNIRDLDARQDTAESSAESEFPTLSLTEIQNAHGIMDVLAEMLNAIDPSNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTTDESLLCQGLALNDDLQRVLARHESILSGTSTQNGNHVENSKPASAGQLVDIDAPLVDTGDTGKQTDGRSSSGAETGSQTLNQLLLPAPAASSNGSAVPAKVDPKLDLLSGDNYNSPKADTSLALVPLGEPHPASPVSDQNSLVLFDMFSNGDTAPKSVNTQQTNVAGQSGPFTPQFQQQQTFISQGGFYPNGNVPNAGSPQYEQSLHTQNTGPAWNGQVAEQQQPASPYGAQNSGSLPPPPWEAQPVDNGSPIAGAQYPQPPQASHMVMTHAQGAANHQGPQAMGYDQGAGMYMQPHANHAGSNQLGMHPQHIQGVAGPYMGMASHQTQGGPAVSMYPQQMYGNQYAGYGYGQQQPGVPYIEQQMYGMTVRDDSYLRNSNQVPMSYVPSGKPSKPEDKLFGDLVDMAKVKPKPTPGRAGSM 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03001 662 MobiDBLite consensus disorder prediction 432 474 - -
Car04g03001 662 Pfam GAT domain 196 269 IPR004152 GO:0035091|GO:0043130
Car04g03001 662 PANTHER TARGET OF MYB PROTEIN 1 1 656 - -
Car04g03001 662 MobiDBLite consensus disorder prediction 303 317 - -
Car04g03001 662 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Car04g03001 662 MobiDBLite consensus disorder prediction 268 283 - -
Car04g03001 662 CDD VHS 2 132 - -
Car04g03001 662 CDD GAT_GGA_like_plant 188 266 - -
Car04g03001 662 MobiDBLite consensus disorder prediction 268 317 - -
Car04g03001 662 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Car04g03001 662 Gene3D - 1 135 IPR008942 -
Car04g03001 662 PANTHER TOM1-LIKE PROTEIN 1 656 IPR044836 GO:0035091|GO:0043130|GO:0043328
Car04g03001 662 Gene3D - 183 275 IPR038425 -
Car04g03001 662 SUPERFAMILY GAT-like domain 141 269 - -
Car04g03001 662 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Car04g03001 662 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Car04g03001 662 MobiDBLite consensus disorder prediction 432 498 - -
Car04g03001 662 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03001 Car-Chr4 57769446 57780550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03001 - - gmx:100809022 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03001 04 57769446 57780550 Car04g03001 04 57769446 57780550 ECH
Car05g03085 05 75638815 75645646 Car04g03001 04 57769446 57780550 PCT