Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03026 ATGAGTAGACCAACAACCCGGAGTAAAAATAAAAGACAAAAACCGGGGGATGATGGTGCCTGTACTAATGAAATTTGGAGGAAAATTCACGAAACAGGTGTGGTTACTGGGGATGATATTAATCAATTGTATATGATTTGGAAACCGGCATGTTCTGGCTGCCGTGTCAATACTAAAGATAATCCAAATTGCTTCTGTGGATTCGTTCCACCTCCTAATGGATTCAGGAAGACTGGCTTATGGGAGAAGATGTCAGATTTTGTTGAAAGTCTTGGCCCTGATCCAAACAAGGACCTTCGTGCTTCGGCTGATTCTCCTGCAGGTCTAACAAATCTTGGAGCAACATGTTATGCCAATGGAATACTCCAATGCTTGTACATGAACAAATTATTCCGAGAAGGCTTATTTAATGTGGAACCAGTTGTTTTAAGGCAACAACCAGTATTAGACCAACTAGCTCGACTTTTTGCGCAGTTGCAAACTAGTAAAATGGCTTTCATAGATTCTTCTCCCTTTGTGAAAACACTGGACCATGAATTATTGACATTGCTTTTGTCATTGCTTGAGCGTTGTCTGAGCACATCCAAAGTTCCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGCGGAAGTGTGTCTCATGTGACAACGTGCTCGCAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAAGATTTCTATGAGTTGGAGTTGAATGTCAAGGGACTGAAAAGTTTAGATGAGAGCCTAGATGATTACCTAACTGTTGAAGAGCTTCAAGGAGACAATCAATATTTTTGTGAGTCATGCAATGCAAGAGTTGATGCTACTCGCAGCATCAAGCTGTGTACATTGCCTGATGTGCTTAATTTTCAACTTAAACGTTGTGTTTTTCTTCCAAAGACTACAACTAAGAAGAAAATTACTTCTGCATTTTCATTTCCTGCGCAACTTGATATGCGGCATAGACTGTCTGAGTTGTCTCAGTTTGATTTGGTATATGACTTGTCAGCTGTACTGATTCACAAGGGAACTGGTGTAAATAGTGGCCATTACATCGCTCATATCAAGGACAAAAATACAGGGCAGTGGTGGGAATTTGATGATGAGCATGTTACTAATTTGGGTCACCATCCATTTGGCGAAGGATCGTCTAGTTCTACTACTAAATTCATTGCAACTGATGTGGTTCACTCTGAAGCAAGGATAGCTGAAAGTAATGGAAATGGTTTAAACGCCACACATTCACAATCTTCACTTATGGACGCATTTTCTTCTTGTGATGCATACATGTTAATGTACCATCTTAGAAATACAACCAATATAAATGAAAACGGGGACTTAGTTGGTGGTGCTAACCTTAAAGAAAGAGAGGGTGTTGTAGCTGCTGCACGAGATAGCACTTCTCTTCCTTCTCATCTTTATGACGAGATTCACAATTTCAACGCCTCATATCTTGATGCTTGTCAACAATATAGTTGTCGAAAAGAGTTAGAATTGAGTCGTATTACTGATAGGAGACAGGAAGTTCGATCTGTTTTAGCTGAAGCTCCTGTTCCACCATTTGAGAGACCATTTTATTGGATTTCTAGTGACTGGCTTCGCCAGTGGGCTGACAACATTGTTACAACTTCTATCGACAACACATCCATCCAATGTTCACATGGGAAAGTCCCAGTTTCAAAGATTACCTCAATGAAACGACTGTCTGCCAAAGCCTGGGATAAGTTGTCATCCAAGTATGGTGGGATTCCAACACTGTCTCACGATGATCATTGTCGGGATTGTCTGATACATGAGGCCCAGACTGTGGTATCAGCTACTACCTATCGGGATAGAAGAGAATCAATGAAGCCACTTGCTCGGAATATTCTTGATGGAAACTGTCTAGATGGAAAGTATTTCATATCCAGATCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTCCTTGATGCTCCATCTGAAACTGATGCTCGACTAACGGCTGCAATTAGTTGTCCACACGGTCTATTAATGCCTGAGCAAGCTCCCGGTGCTAAGCGGGTGCTTATTCCTGAGAGTTTTTGGCTCTTCTTGTACGAAGATGCTATTTATGTAAAACCCGATGATCCTTTAGGTGGCCCAACTCTTCCTTCAAGTTCCATAGAGTGTTCCCAATGCATTAATGAATTATCTAAAGCTGCATGCTTGGAGGACTCCTTGAGGTTATTAGTTAAACAAAAGCAGCGCCAGAATCACGAGAAGTTATTCCAGGCTAAAAGTATGCCACTCTCTGTGCATTGCAAATATTTCTTGGTGCCTACTTCATGGATTTCAAAGTGGAGAAATTACATTAGTCCATCATTCAAGAATCCAGATAAACCTGAAACTTTAGACGGGGTAATTGATTCGCTGATGTGTAAAAAGCACTCACAACTTGTTGAAAGACCTCCTCAGCTGATTTTCAGACGTGGTACCATAATTCAGAGAGAATCTTCTGCAGGTGGCTTAACCATCATATCCGAGACTGATTGGATATGCTTATGTGAAGAATGGGGTGGTACTGAGACCAAAGGAATATCTGCAACAATTGATCATATTAGTGATTCAGATAACTTTTTGACTGGGTCCAGTGACGAGATGCAGATATGTGAGGATCAGTCACTCGCAGGGGATAAAATGAATAATGAAAATCGAACTGGACAAATTTTGATCAAGACTTGTCCCGAGGTTTGTCAAAGTTGCATTGGAGAAAGAGAAAGCTGCGAGTTAATGCATAAACTTAACTATTGCAATGAGGACATATGTGTAATTCTTGTTCGTGGTAAGGAGGTACCTAGATCACTCTTGGAGGCCTCAAAGGGATTAATTGAAACAGATCGGCGGGTTTCCAAGCGCTCCCGGAAGACTAAAAATGGGAGTTCAGTTAGTCTAAAAGTTTCTGCTTCAACATCACTATACCAGCTGAAGATGATGATATGGGAATCTTTTGGGGTTGTCAAGGAAAACCAGATACTACATAAAGGTGATAGGATAATTGTTATTGACGATGAAAGTGCTACCCTTGCGGATGCAAACATATTTGCCGGAGATCAGATTATAGTGAGGGATTCTGAGATCCATGAAAATCGAGATATTGCTGATGAGCTCTGCAGTGATAAGATGGATCTGCAGCATACTGAGGAAGGTTTTCGTGGAACACTTCTTACAGCAAACATTTCATCCCAGGTTGTTTAA 3219 0.4101 MSRPTTRSKNKRQKPGDDGACTNEIWRKIHETGVVTGDDINQLYMIWKPACSGCRVNTKDNPNCFCGFVPPPNGFRKTGLWEKMSDFVESLGPDPNKDLRASADSPAGLTNLGATCYANGILQCLYMNKLFREGLFNVEPVVLRQQPVLDQLARLFAQLQTSKMAFIDSSPFVKTLDHELLTLLLSLLERCLSTSKVPKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLTVEELQGDNQYFCESCNARVDATRSIKLCTLPDVLNFQLKRCVFLPKTTTKKKITSAFSFPAQLDMRHRLSELSQFDLVYDLSAVLIHKGTGVNSGHYIAHIKDKNTGQWWEFDDEHVTNLGHHPFGEGSSSSTTKFIATDVVHSEARIAESNGNGLNATHSQSSLMDAFSSCDAYMLMYHLRNTTNINENGDLVGGANLKEREGVVAAARDSTSLPSHLYDEIHNFNASYLDACQQYSCRKELELSRITDRRQEVRSVLAEAPVPPFERPFYWISSDWLRQWADNIVTTSIDNTSIQCSHGKVPVSKITSMKRLSAKAWDKLSSKYGGIPTLSHDDHCRDCLIHEAQTVVSATTYRDRRESMKPLARNILDGNCLDGKYFISRSWLQQWWKRKVLDAPSETDARLTAAISCPHGLLMPEQAPGAKRVLIPESFWLFLYEDAIYVKPDDPLGGPTLPSSSIECSQCINELSKAACLEDSLRLLVKQKQRQNHEKLFQAKSMPLSVHCKYFLVPTSWISKWRNYISPSFKNPDKPETLDGVIDSLMCKKHSQLVERPPQLIFRRGTIIQRESSAGGLTIISETDWICLCEEWGGTETKGISATIDHISDSDNFLTGSSDEMQICEDQSLAGDKMNNENRTGQILIKTCPEVCQSCIGERESCELMHKLNYCNEDICVILVRGKEVPRSLLEASKGLIETDRRVSKRSRKTKNGSSVSLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIVIDDESATLADANIFAGDQIIVRDSEIHENRDIADELCSDKMDLQHTEEGFRGTLLTANISSQVV 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03026 1072 Pfam Ubiquitin carboxyl-terminal hydrolase 108 435 IPR001394 GO:0004843|GO:0016579
Car05g03026 1072 ProSiteProfiles DUSP domain profile. 502 594 IPR006615 GO:0004843
Car05g03026 1072 SUPERFAMILY DUSP-like 508 593 IPR035927 -
Car05g03026 1072 SUPERFAMILY Ubiquitin-like 965 1031 IPR029071 -
Car05g03026 1072 SMART dusp 524 596 IPR006615 GO:0004843
Car05g03026 1072 SUPERFAMILY Cysteine proteinases 106 440 IPR038765 -
Car05g03026 1072 CDD Ubl_USP48 962 1063 IPR044743 GO:0004197|GO:0004843|GO:0016579
Car05g03026 1072 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1042 - -
Car05g03026 1072 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1042 - -
Car05g03026 1072 Gene3D - 961 1032 - -
Car05g03026 1072 ProSiteProfiles DUSP domain profile. 609 716 IPR006615 GO:0004843
Car05g03026 1072 ProSiteProfiles DUSP domain profile. 738 858 IPR006615 GO:0004843
Car05g03026 1072 Gene3D Cysteine proteinases 93 438 - -
Car05g03026 1072 CDD Peptidase_C19L 108 435 IPR033841 GO:0004843
Car05g03026 1072 Gene3D - 734 854 IPR035927 -
Car05g03026 1072 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 438 IPR028889 -
Car05g03026 1072 MobiDBLite consensus disorder prediction 1 21 - -
Car05g03026 1072 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 335 353 IPR018200 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03026 Car-Chr5 75113438 75123120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03026 105 373 Miscellaneous Gene Families AT2G24640 29.195 5.05e-22 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03026 - K11858 gmx:100782778 1799.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03124 04 59350938 59358927 Car05g03026 05 75113438 75123120 PCT