Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02992 ATGAGTAATCAGATTGAGATTCCACTTTTGGATTTTAGTAAAGTAAATGGAGTGACATTAGAAGAAGGGAGTGAAAGGTGGAAAGAAATGAGCAAGAAAGTGAGAGAAGCATTTGAGAGTCATGGTTGCTTCCTCTTGTTATGTGATCAAATTCCAAATGATTTGCGTCAACAAATGTTCGCGGATATGAAATCATTGTTTGATCTACCCGAAGAGACCAAAAAGAAGTTCATTGGGTCAAAGGCTTATAGAGGCTACACGGCTAATAGTCACGTCATTCCCCATTGTCAAAGCTTTGGGATTGATGATGCTCTTAAGCCAGATACCACTGAAAATTTTACTAACCTCATGTGGCCTCAAGGAAATCCAACTTTTTGTGAGACACTCGGTTCATTGACCATAAAAACTCGAGAACTAAGTGCTCTTATCTTGAAGATGATTATCGAAGGTTTTGGACTTCCACAACAATACAACTTGGATGTTGAAGAGCTGAATAACTCCAACGATTCACGAATGACTAGGTACCTACTTCCTGAGGAAAACAAGGATCGTGAGATTGCTTTGGTACCTCACACTGACAAAGGAACCTTAGCTGTCATATGCCACAATGAAGTCCAAGGTCTGCAGGTTTTACCTAAAAATGGCGAATGGGTTGATGTAGTTATTCCCCCAAATGGTTATATAGTACTTGTTGGTGACATGTTGAAGGCATGGAGCAATGGAAGGTTCCAGGCACCCACACACAGAGTGGTGACAAGGGGAGATAAAGAGAGATTAGCATTTATAGTTTTTACTGTGCCAAAGGAAGATATGACCATTAAGGTGCCATCTGAATTGGTGGATGATGAAAATCACCCTCTCCGTTACCGACCATTCAAATATGAGGACTTCATAAATTTTCATTATACAACTCGCACAGAGAAAGGAGTGCTTGAAGAATTTGCTGGCCTTTGA 954 0.4036 MSNQIEIPLLDFSKVNGVTLEEGSERWKEMSKKVREAFESHGCFLLLCDQIPNDLRQQMFADMKSLFDLPEETKKKFIGSKAYRGYTANSHVIPHCQSFGIDDALKPDTTENFTNLMWPQGNPTFCETLGSLTIKTRELSALILKMIIEGFGLPQQYNLDVEELNNSNDSRMTRYLLPEENKDREIALVPHTDKGTLAVICHNEVQGLQVLPKNGEWVDVVIPPNGYIVLVGDMLKAWSNGRFQAPTHRVVTRGDKERLAFIVFTVPKEDMTIKVPSELVDDENHPLRYRPFKYEDFINFHYTTRTEKGVLEEFAGL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02992 317 Gene3D - 5 313 IPR027443 -
Car05g02992 317 Pfam 2OG-Fe(II) oxygenase superfamily 169 265 IPR044861 -
Car05g02992 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 316 - -
Car05g02992 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 267 IPR005123 -
Car05g02992 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 88 IPR026992 -
Car05g02992 317 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 3 316 - -
Car05g02992 317 SUPERFAMILY Clavaminate synthase-like 4 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02992 Car-Chr5 74816283 74817708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02992 3 290 Glycosyltransferase AT5G59530 25.000 1.46e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02992 - - mtr:MTR_4g021380 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03154 04 59756233 59762426 Car05g02992 05 74816283 74817708 PCT