Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03154 ATGGGTAGTGATAGTGAAATGATCCCATGTCTAGATTTTTCCATGTTTGAGTTAGGATTTGATTATGAAGAGAATGAAGAGTGGAAAAAAATGAGTAAAAAAGTGAGAGAAACACTTGAGAGATATGGTTGCTTCATTTTAATGGATGATAAGAATAAGATCTCAAAGAGTTTATGTGAATACATGTTAAATGGAATGAAAGCCTTGTTTGATTTACCTGAAGAAATTAAGAGGAAGTACACAAGTGTCATGCCATTTAGTAGTTATAATAGTCATTGTACCACCATTCCACTATTTCAAAGTTTTGGGATTGTTGATGCTCCCTTTGGTGATACTACTATGGAATTTACTAATCTTATGTGGCCTCAAGGAAACCCAATTTTCAGTGAGACATTGAAGGCCATGAGCTCCAAGATGCTTGAACTGAATTACCTCATTCTTAAGATGATTCTAGATGGTTATGGTCTTCCAAAACAATACACTTCAGATATTGAAAAATTGAAGAGCTCTAGTAATTTTCGTTTGATTAAGTACAAAGTTCATGATGAAATCAACAAAGATTGTGAAGCTTTGTTGCCTCACACCGACAAAAACACTTTAACCATTTTATGCCAAAATGAAGTCCAAGGTCTTGAGGTTCTTACCAAGTCAAACAAATGGATTCAATTGAACATACCCCAAGGAGGTTTCGCTGTCTTAATTGGTGACACACTCAAGGCATGGAGCAATGGGAGACTTCATGCGGCTACACATAGAGTGATGATGAATGGAGACAAAGAAAGGTACTCATTTGCACTTTTTTCATTGCCAAAGGAAGAGGTGAAAATTGAGGTGCCACATGAATTGGTGGATGATAAAATGCATCCTCTACGTTACAAGTCATTCAATTATGGAGATTACTTAGACTACTATGTTTCAACTCTCAAAGAAAATGCACTTGAGGCATTTATAGGAGTTTAA 960 0.3573 MGSDSEMIPCLDFSMFELGFDYEENEEWKKMSKKVRETLERYGCFILMDDKNKISKSLCEYMLNGMKALFDLPEEIKRKYTSVMPFSSYNSHCTTIPLFQSFGIVDAPFGDTTMEFTNLMWPQGNPIFSETLKAMSSKMLELNYLILKMILDGYGLPKQYTSDIEKLKSSSNFRLIKYKVHDEINKDCEALLPHTDKNTLTILCQNEVQGLEVLTKSNKWIQLNIPQGGFAVLIGDTLKAWSNGRLHAATHRVMMNGDKERYSFALFSLPKEEVKIEVPHELVDDKMHPLRYKSFNYGDYLDYYVSTLKENALEAFIGV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03154 319 Gene3D - 5 316 IPR027443 -
Car04g03154 319 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 5 316 - -
Car04g03154 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 316 - -
Car04g03154 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 270 IPR005123 -
Car04g03154 319 Pfam 2OG-Fe(II) oxygenase superfamily 176 268 IPR044861 -
Car04g03154 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 88 IPR026992 -
Car04g03154 319 SUPERFAMILY Clavaminate synthase-like 6 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03154 Car-Chr4 59756233 59762426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03154 8 304 Glycosyltransferase AT5G59530 20.724 1.92e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03154 - - gmx:100817159 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03154 04 59756233 59762426 Car05g02992 05 74816283 74817708 PCT