Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02968 ATGGGTCGGAGAAAAATTCAACTATTTGATGAGAAAAAAGATGGGTTTTTCTCACTTTCCGATTTGGGTTCTCAATCTCATGACAACTACTACTCTTATCCAGGTGGTTTGTTTGCTAGTGTTGGTCAAATGGGAATAGGGTTTGGTGTTCAACAACCCAATCCTTCTGATAACAATGATGACGACCCTAAACTTCCCTTCAATGAATTGTACACAAAGTATATTCAATCACTGTGGAAATTTGAGGCTAATGGTGTTAAGGTAAAGGGGGGAGAGGAAGGAGTTAAGGGAAAGAATAAAAATGGTGGGTTTAAGCTGAAGATTAAGATAAGGAATCCTTCTGTTAGGAGGTTGTGTAGTGGAGCAATTGCTGGGGCAGTGTCTAGGACCACTGTCGCACCTTTGGAGACTATTAGGACTCATTTGATGGTGGGGAGTAGTGGCCATTCTTCCACTGAGGTTTTCCAAAATATTATGAAAAGTGATGGATGGAAGGGATTGTTTAGGGGTAATCTTGTTAATGTTATAAGGGTTGCTCCTAGCAAGGCCATTGAGCTATTTGCTTATGATACAGTAAACAAGAACCTATCCGCAAAGCCAGGGGAACAGTCCAAACTCCCGGTTCCTGCATCATTGATTGCAGGTGCCTGTGCCGGAGTGAGTTCAACAATATGCACGTATCCACTTGAACTACTCAAGACTAGACTAACTATCCAGAGAGGTGTTTATAATGGTCTCCTCGACGCATTCGTGAAAATAATTAAAGAAGAGGGTCCTGCAGAACTTTACAGAGGCCTGACTCCTAGTCTTATTGGAGTTATTCCATATTCAGCTACCAATTACTTTGCCTATGACACTCTACGGAAAGCATATAGAAAAATCTTCAAACAAGAGAAGATTGGCAACTTTGAAACCCTGTTGATTGGTTCAGCGGCTGGGGCTATTTCAAGTAGCGCGACTTTTCCACTTGAGGTGGCTCGCAAGCATATGCAAGTTGGAGCTCTTAGTGGAAGACAGGTTTATAAAAATGTGGTTCATGCCCTTGTTAGCATACTTGAGCAAGAAGGGATCCAGGGTCTATATAGAGGGCTTGGACCTAGTTGCATGAAGTTAGTGCCGGCTGCCGGAATCTCTTTCATGTGTTACGAAGCGTGCAAGAAGATACTGATAGATGACGAGGAGGAGGAATAG 1191 0.4274 MGRRKIQLFDEKKDGFFSLSDLGSQSHDNYYSYPGGLFASVGQMGIGFGVQQPNPSDNNDDDPKLPFNELYTKYIQSLWKFEANGVKVKGGEEGVKGKNKNGGFKLKIKIRNPSVRRLCSGAIAGAVSRTTVAPLETIRTHLMVGSSGHSSTEVFQNIMKSDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSAKPGEQSKLPVPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYNGLLDAFVKIIKEEGPAELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKQEKIGNFETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVVHALVSILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKKILIDDEEEE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02968 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 300 388 IPR018108 -
Car05g02968 396 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 26 395 - -
Car05g02968 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 195 IPR018108 -
Car05g02968 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 290 IPR018108 -
Car05g02968 396 PANTHER SOLUTE CARRIER FAMILY 25 26 395 - -
Car05g02968 396 Pfam Mitochondrial carrier protein 114 197 IPR018108 -
Car05g02968 396 Pfam Mitochondrial carrier protein 299 391 IPR018108 -
Car05g02968 396 Pfam Mitochondrial carrier protein 205 293 IPR018108 -
Car05g02968 396 Gene3D Mitochondrial carrier domain 109 394 IPR023395 -
Car05g02968 396 PRINTS Mitochondrial carrier protein signature 117 130 IPR002067 GO:0055085
Car05g02968 396 PRINTS Mitochondrial carrier protein signature 130 144 IPR002067 GO:0055085
Car05g02968 396 PRINTS Mitochondrial carrier protein signature 170 190 IPR002067 GO:0055085
Car05g02968 396 PRINTS Mitochondrial carrier protein signature 221 239 IPR002067 GO:0055085
Car05g02968 396 PRINTS Mitochondrial carrier protein signature 263 281 IPR002067 GO:0055085
Car05g02968 396 PRINTS Mitochondrial carrier protein signature 309 331 IPR002067 GO:0055085
Car05g02968 396 SUPERFAMILY Mitochondrial carrier 113 384 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02968 Car-Chr5 74623644 74627868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02968 299 396 Organic Solute Cotransporters AT4G32400 31.373 4.94e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02968 K14684 - qsu:111999876 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02968 05 74623644 74627868 Car05g02968 05 74623644 74627868 ECH
Car04g03172 04 60008883 60012503 Car05g02968 05 74623644 74627868 PCT