Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03172 ATGGGTCGCAAAGGAATTAACAAAAACAATCTCTTTGATGACAAAAGACACGCTTTTTTCTCAATCTCCAATCTGGGTTCTCAATGGGCTGACGTTGATGTTCAAGAACAAGGGTATTACAATCATTTCCACCACCCTGGTGGTTTATTTGCAAGCATTGGTCAAATGGGTATGGGTTTTGGTGGAGTTCAACAACCAAATTCGTCTTCCGATTCTTCTTCTCAACGAAACAACGGAATGAGGATTCCATGCACTGAGTTGTACATTAGGTATGTGCAATCAGAAGGGAAAGTGAAGATTCTTGGTGTTCCTGATGAGGATGAAGATGAAATAGTGGAAGGTGTTAAGGGGAAGAAAAAGGGTAGTCTTAAAAAGTTTAAGATTAAGGTCAAAAACCCTTCGTTGAGGAGGTTGATTAGTGGTGCTTTTGCTGGGGCTATTTCAAGGACTGCTGTTGCACCTTTGGAAACTATTAGGACTCATTTGATGGTTGGAAGTAGTGGTCATTCTTCTAGCGAGGTGTTTAACAATATCATGAAGACTGATGGGTGGAAAGGGTTGTTTAGGGGTAATTTTGTCAATGTCATAAGGGTTGCACCTAGCAAGGCCATTGAGCTATTTGCTTATGATACAGTTAACAAGAACCTCTCCTCAAGGCTTGGGGAACAGCCTAAACTCCCTATTCCTCCATCATTGATTGCAGGTGCTTGTGCTGGAGTTAGTTCAACTATTATCACATATCCTCTAGAATTACTCAAGACTAGATTAACTATCCAGAGAGGTGTTTATAACGGTCTACTCGACGCGTTTGTGAAAATAATTCGAGAAGAGGGTGCTTCGGAACTGTATAGAGGCCTTGCTCCTAGTCTTATTGGAGTTATTCCATATTCTGCCACTAATTACTTTGCCTATGACACTTTAAGGAAAGTGTACAAAAAAGTTTTTAAACAAGAGAAGATTGGCAACATTGAAACCCTTTTGATAGGATCTGCGGCCGGCGCTATTTCAAGTAGCGCTACTTTCCCCCTTGAAGTTGCTCGCAAGCAAATGCAAGTGGGAGCACTTAGTGGAAGACAGGTTTACAAAAATGTGATTCATGCACTTGCATGCATACTTGAGCAAGAAGGTATTCAAGGTTTGTATAGAGGATTAGGACCAAGCTGCATGAAGTTGGTGCCTGCTGCAGGAATCTCTTTCATGTGCTATGAAGCATGCAAGAGGATTTTGATAGAGGAAGATGATAAAGAGGAATAG 1254 0.4123 MGRKGINKNNLFDDKRHAFFSISNLGSQWADVDVQEQGYYNHFHHPGGLFASIGQMGMGFGGVQQPNSSSDSSSQRNNGMRIPCTELYIRYVQSEGKVKILGVPDEDEDEIVEGVKGKKKGSLKKFKIKVKNPSLRRLISGAFAGAISRTAVAPLETIRTHLMVGSSGHSSSEVFNNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSSRLGEQPKLPIPPSLIAGACAGVSSTIITYPLELLKTRLTIQRGVYNGLLDAFVKIIREEGASELYRGLAPSLIGVIPYSATNYFAYDTLRKVYKKVFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKQMQVGALSGRQVYKNVIHALACILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKRILIEEDDKEE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03172 417 Gene3D Mitochondrial carrier domain 128 414 IPR023395 -
Car04g03172 417 PANTHER SOLUTE CARRIER FAMILY 25 43 415 - -
Car04g03172 417 Pfam Mitochondrial carrier protein 133 217 IPR018108 -
Car04g03172 417 Pfam Mitochondrial carrier protein 226 313 IPR018108 -
Car04g03172 417 Pfam Mitochondrial carrier protein 320 411 IPR018108 -
Car04g03172 417 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 43 415 - -
Car04g03172 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 215 IPR018108 -
Car04g03172 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 320 408 IPR018108 -
Car04g03172 417 SUPERFAMILY Mitochondrial carrier 133 404 IPR023395 -
Car04g03172 417 PRINTS Mitochondrial carrier protein signature 137 150 IPR002067 GO:0055085
Car04g03172 417 PRINTS Mitochondrial carrier protein signature 150 164 IPR002067 GO:0055085
Car04g03172 417 PRINTS Mitochondrial carrier protein signature 190 210 IPR002067 GO:0055085
Car04g03172 417 PRINTS Mitochondrial carrier protein signature 241 259 IPR002067 GO:0055085
Car04g03172 417 PRINTS Mitochondrial carrier protein signature 283 301 IPR002067 GO:0055085
Car04g03172 417 PRINTS Mitochondrial carrier protein signature 329 351 IPR002067 GO:0055085
Car04g03172 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 310 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03172 Car-Chr4 60008883 60012503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03172 1 415 Organic Solute Cotransporters AT4G32400 61.928 1.79e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03172 K14684 - gmx:100816041 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03172 04 60008883 60012503 Car04g03172 04 60008883 60012503 ECH
Car04g03172 04 60008883 60012503 Car05g02968 05 74623644 74627868 PCT