Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02962 ATGAAATTCTGGAAGATCTTGAAGAAGTTGATCGAGCAGACCCTGCCCGAATGGCGTGACAAGTTCTTGTCTTACAAAATCTTGAAGAAACAATTGAAGGTTATGTGTCCCAAAGATGCTCAAACTCCTCTCGGGTTGGACGTTGACCAGGTCAACCACTTTCTTTACCTATTGGAGGTCGAAATTGATAAGTTCAATGTTTTCTTTGTTAACAAGGAAGAGGAATACGTCATCAAATGGAAGGAGTTGCAAGACAGGGTTGGCAGAGCCATGGATTATTCAGATGTGGAGTTGATGTCATTAGGAAGAGAAATAGTGGATTTTCATGGAGAGATGGTTTTGTTAATGAACTATAGTGCACTTAACTACACAGGCATGATGAAGATAATAAAGAAACATGATAAGCGAACCGGTGCACTACTCCGCTTGCCTTTTATCCAAGAAGTGCTGAACCAACCCTTTTTCGAAACTGATGTGCTTAATGTCCTCGTTAAGGAGTGTGAGATGATACTAAGCATTCTTTTCACCAAGAATGATGGAGCTTCTTGTCCAAGCTCATCAACTAGTGAGGAACAAGGGTGTGGCTCCAAGTCCAATATGATTGTTGATGAAAATAAAGAGAAGCTGATGCATGTTCCTAAAGAACTTTCTGAAATTGAAAATATGGAGAATGCATTCATCAAGCTAACTTTATCAGCATTGCAAACATTAGAAGAAATTCGAGGTCGAAGCTCGACGCTCAAATGCAAAGAGTAA 756 0.3995 MKFWKILKKLIEQTLPEWRDKFLSYKILKKQLKVMCPKDAQTPLGLDVDQVNHFLYLLEVEIDKFNVFFVNKEEEYVIKWKELQDRVGRAMDYSDVELMSLGREIVDFHGEMVLLMNYSALNYTGMMKIIKKHDKRTGALLRLPFIQEVLNQPFFETDVLNVLVKECEMILSILFTKNDGASCPSSSTSEEQGCGSKSNMIVDENKEKLMHVPKELSEIENMENAFIKLTLSALQTLEEIRGRSSTLKCKE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02962 251 Pfam SPX domain 103 149 IPR004331 -
Car05g02962 251 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 249 IPR031142 GO:0016036
Car05g02962 251 PANTHER SPX DOMAIN-CONTAINING PROTEIN 1 1 249 - -
Car05g02962 251 CDD SPX_AtSPX1_like 2 136 - -
Car05g02962 251 ProSiteProfiles SPX domain profile. 1 147 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02962 Car-Chr5 74575752 74577172 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02962 - - mtr:MTR_3g107393 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02962 05 74575752 74577172 Car05g02962 05 74575752 74577172 ECH
Car05g02962 05 74575752 74577172 Car04g03181 04 60120422 60124232 ECH