Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03181 ATGAAATTCTGGAAGATTCTCAGCAACCAGATCGAGCAAACGTTACCGGATTGGCGTGATAAGTTTTTATCCTACAAAGATCTTAAGAAGCAGTTGAAGCTAATTAACCCTAAAGATCCTTCTTCCTTTAAACGGCGTCGTTTGGATGAAGATGGCAACGCCGATGCCGATGTATCCAAAGAGGTTAACGACTTTCTTAGGTTATTGGAGGTTGAGATTGAAAAATTCAACGCTTTTTTTGTTGAAATGGAAGAAGAATATGTTATCAAATGGAAGGAATTGCAAGACAAAGTTGCCTGGGCCAAGAATTCTGATGCAGAGTTGATGTCAGTAGGGAGGGAAATTGTGGATTTTCACGGAGAGATGGTTTTGTTAGAGAACTATAGTGCACTTAACTACACAGGTCTGGTTAAGATAATAAAGAAATATGATAAGCGAACTGGTGCACTGATTCGATTACCTTTTATCCAAGATGTCTTGAACCAGCCGTTCTTCAAAATTGATGTGCTTAACAAGCTTGTAAAAGAGTGTGAGCTGATGCTAAGTATTATTTTCCCCAAAAGTGGGCCTCTAGGTCAATCCTTATCAACCAGTGAGGTTTTTGAGGAAGTTACACGTGGCTCCACATCTGCAAACGGAACTAAAGAGACATTTGAGCATGTCCCCAAAGAACTTTCTGAGATTCAAAATATGGAAAACATTTTCATCAAACTAACTACATCGGCACTGGATACACTGAAAGAGATTAGGGGTGGAAGCTCAACTGTAAGCATATACTCATTGCCTCCTCTGCATAGTGAGACTCTGGTAGAGGATTGA 819 0.3993 MKFWKILSNQIEQTLPDWRDKFLSYKDLKKQLKLINPKDPSSFKRRRLDEDGNADADVSKEVNDFLRLLEVEIEKFNAFFVEMEEEYVIKWKELQDKVAWAKNSDAELMSVGREIVDFHGEMVLLENYSALNYTGLVKIIKKYDKRTGALIRLPFIQDVLNQPFFKIDVLNKLVKECELMLSIIFPKSGPLGQSLSTSEVFEEVTRGSTSANGTKETFEHVPKELSEIQNMENIFIKLTTSALDTLKEIRGGSSTVSIYSLPPLHSETLVED 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03181 272 CDD SPX_AtSPX1_like 2 146 - -
Car04g03181 272 Pfam SPX domain 114 158 IPR004331 -
Car04g03181 272 ProSiteProfiles SPX domain profile. 1 157 IPR004331 -
Car04g03181 272 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 267 IPR031142 GO:0016036
Car04g03181 272 PANTHER SPX DOMAIN-CONTAINING PROTEIN 1 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03181 Car-Chr4 60120422 60124232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03181 - - adu:107495354 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03181 04 60120422 60124232 Car04g03181 04 60120422 60124232 ECH
Car05g02962 05 74575752 74577172 Car04g03181 04 60120422 60124232 ECH