Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02955 ATGATGGATCCGAGTAATGCTTCACTGGCAGATGGACTTGAAGGAGTACACCAAAATGGTGTCCATGAAGAACTTTCTAATTCTGCAAAGGATGGTGTTGTTTTAAATGTAGACCCTGTAGTTGCTGAAATTGTAGAAAATGTAGATCCAAATGGAAATTATGAAAATTTCGACCAGTCAGATAGCGTTGGAAATGATAATTTGTCTATGGAAGAAATGAAAGAAGGAACAAATGACAATATAGAGGGAAATGATGTTACTAAGGAAGAGGAAGTGGAAATCATTGATGAAACAGGTAAATCTAGGACACGAAAGGGTCCTGTCAAGAATAAGAATGCAAAACAACCAAGTCCTAGAGGTGTTCATACAAGTTCAGTTAGAAAGAACAAAGACGGGAAAGATGAAGAGGCATCAGCAGCATCTTCTGTTTCAAACGGTACTCTCACTTTAGACTCTCATCCAAGACAGCTGGTTAAGAACAAAGTGATCAATGACAAGCAGACTCGACTGTCCAAGATCCCTGGAAAGTCTGATGCAGCATCTTCTGAAGCACCAACGGAGAAGACTGGACCACGATTAATAAAGAAAGAACCACTTGATAATGTTCCAGGAAAAGCTGAATCATCTTCTCCTACTGCAGAAGATGCCAAAGCTCGCAGAGTAGGGACAATGCCAAATTATGGATTCAGTTTCAAATGTAATGAGCGAGCTGAGAGAAGAAAAGAGTTTTACTCTAAGCTTGAGGAAAGGATTCATGCGAAGGAAGTAGAGGAGAGCAACATGCAAGCAAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGAAACTTAGGAAAAAACTAGCATTTAAAGCAACTCCAATGCCAAGCTTCTATCAGGAACCTCCTCCTTCTAGGGTGGAGTTGAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTTGGTCGAAGGAAGGATTCAATATCTTCAGAGCAAGAAGGAAGCACTAACATTAGTGCTCAACAATGTCGTTTAAGTTTGGATGAGAAAGTGTCTCAGAGTAACCCCACTAAAGGAATTAGTCCTCCTGTTCATCAAAAGAAGCCACAACGAAGATCTCTCCCTACCCGACTGACTCCTGAAAGAATCAGTTCATCCAATTCAGCAACTGCACGGACTTCATCTAAGGCGGTGAATGATGAGAAAACCTCCTTATCTAGTGTAACAACTGAAGTTACCATCTTGTCCAATGCAACAAGGGAAGAGAAAGATGAAGCAGCTGCAGCTATTGAGGGGAACAGTGCCTTGTCTGATGAGACGAGTGAAACTCTGTCTCTGAACATAGAGCCAGATGAAGCAGAATCTCATATGAATGGTGTTATAGTCATCGAAGACAAACCACAGCTTACCTTGGTACAACAACCCATAGCAGCAGAGCATTAA 1422 0.4135 MMDPSNASLADGLEGVHQNGVHEELSNSAKDGVVLNVDPVVAEIVENVDPNGNYENFDQSDSVGNDNLSMEEMKEGTNDNIEGNDVTKEEEVEIIDETGKSRTRKGPVKNKNAKQPSPRGVHTSSVRKNKDGKDEEASAASSVSNGTLTLDSHPRQLVKNKVINDKQTRLSKIPGKSDAASSEAPTEKTGPRLIKKEPLDNVPGKAESSSPTAEDAKARRVGTMPNYGFSFKCNERAERRKEFYSKLEERIHAKEVEESNMQAKTKETQEAEIKKLRKKLAFKATPMPSFYQEPPPSRVELKKIPTTRAKSPKLGRRKDSISSEQEGSTNISAQQCRLSLDEKVSQSNPTKGISPPVHQKKPQRRSLPTRLTPERISSSNSATARTSSKAVNDEKTSLSSVTTEVTILSNATREEKDEAAAAIEGNSALSDETSETLSLNIEPDEAESHMNGVIVIEDKPQLTLVQQPIAAEH 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02955 473 MobiDBLite consensus disorder prediction 48 229 - -
Car05g02955 473 MobiDBLite consensus disorder prediction 286 401 - -
Car05g02955 473 MobiDBLite consensus disorder prediction 370 401 - -
Car05g02955 473 MobiDBLite consensus disorder prediction 324 354 - -
Car05g02955 473 MobiDBLite consensus disorder prediction 1 33 - -
Car05g02955 473 PANTHER PROTEIN WVD2-LIKE 4 2 463 IPR044833 GO:0008017
Car05g02955 473 Coils Coil 244 264 - -
Car05g02955 473 MobiDBLite consensus disorder prediction 72 104 - -
Car05g02955 473 MobiDBLite consensus disorder prediction 52 67 - -
Car05g02955 473 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 463 - -
Car05g02955 473 MobiDBLite consensus disorder prediction 138 154 - -
Car05g02955 473 MobiDBLite consensus disorder prediction 303 323 - -
Car05g02955 473 Pfam Targeting protein for Xklp2 (TPX2) domain 229 299 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02955 Car-Chr5 74499936 74505288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02955 - - gsj:114408962 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02955 05 74499936 74505288 Car05g02955 05 74499936 74505288 ECH
Car04g03185 04 60188859 60192173 Car05g02955 05 74499936 74505288 PCT