Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03185 ATGGATCTGGTTAACCCTATTCTTGCTGATGGACTCGATGAGGTCCACCAAAATGGTGTTCATGATGAACCTTCTAATTCTGGAGAGGATGGTGGTGTGTCAAATGATTTAGACTCCCGTGTTACTGAAACTATAGAAACTGTAGCTCCGAATGGATATTTGGAAAATTTTAACCAGTCAGAGAGCACTGCAACTGGAGACTCGTCAATAGGGGGAATCGAAGGATCAAATGTCAACGTGGATGGCAATAATACCACTATTTCTAAGGAAAAGGAAGTGAAAAAAACAGTTCAAACGGAACAATCAAGAGCACAAAAGGGTTCTGTCAAGAATAAGAATGCAAAGGTTGCTAGTTCAAGTGGTGTTCATGCAAATTTGGTGAAAAACAGCAAAAATGCAAAAGATAAGCCAGCATCATCCGCTGTTTCAAATGGCACTTCTGCTTTAGAATCTCGCCCTAAACAGTCTATTAAAAGCAGATCATTCAATGATCGGCAGTCTCAAGCGTCCAAGAACCCTTCAAAGTCTGATGCAGCGTCTTCTGAAGTTGCCAAGGAGAAGAAAAAGCCAAAATCATTGAAACCCGTTGATAAAGTTCCAGATGAAGCAGAATCTTCACTTACCAATGCAGAAGACGCCAAACCTCGCAGGGTGGGTACACTTCCAAATTATGGATTCAGTTTCAAGTGCGACGAACGAGCTGAGAAAAGAAGAGAGTTCCTCACTAAGGTTGAGGAAAAGATTCAGGCAAAGGAGGAGGAGAAGAGTAACTTGCAAGCAAAAACCATGGAGAGCCAAGAAAAGGAGATTAAAAAGCTTAGGAAAAGTCTAACATTTAAAGCAACTCCAATGCCAACTTTCTATCAGGAGCCTGCTCCTCCTAAGGTGGAGTTGAAGaagATACCAACTACAAGAGCAAAATCTCCGAAGCTCGGTCGTAAGAAGACTTCAACAAATTCAGAGTCGGATGGAAATGGTAACAGCAGTTCTCAACTAGGTCGTTTAAGTCTCGATGAGAAAGTGTCTCATAGCAACTCCACTAAAGGAGTTGCCCCTGTCCATCAAAAGAAGCCGCTACGAAAGTCCCTTCCTCCTAGACTAGCTTCTGATAGGACCAGTTCATCCAATTCAGTAGCCGGACCTACTTCATCGAAGGCGGTTCATGATGAAAAAACTTCCTTATCTAATGTAACAAAGAAATATACTAGCTTATCCAATGCTACAGGGGAAGAGAAAACTGAGATCACCGCAGCCGATGAAGAGAGCAGTAATACCTTGTCTAGTGAGACAAATGTTGCTCTACCTCTCAATGTGGTTCCTTCAGATAAGCCAAGTGAAGCAGAATCTCATGTGAATGGTGACATAGTGGTTGAAGAGAATCCTCAGCTCATGTTGTCACAAGGACCGATCATGACCGTGCATTGA 1425 0.4246 MDLVNPILADGLDEVHQNGVHDEPSNSGEDGGVSNDLDSRVTETIETVAPNGYLENFNQSESTATGDSSIGGIEGSNVNVDGNNTTISKEKEVKKTVQTEQSRAQKGSVKNKNAKVASSSGVHANLVKNSKNAKDKPASSAVSNGTSALESRPKQSIKSRSFNDRQSQASKNPSKSDAASSEVAKEKKKPKSLKPVDKVPDEAESSLTNAEDAKPRRVGTLPNYGFSFKCDERAEKRREFLTKVEEKIQAKEEEKSNLQAKTMESQEKEIKKLRKSLTFKATPMPTFYQEPAPPKVELKKIPTTRAKSPKLGRKKTSTNSESDGNGNSSSQLGRLSLDEKVSHSNSTKGVAPVHQKKPLRKSLPPRLASDRTSSSNSVAGPTSSKAVHDEKTSLSNVTKKYTSLSNATGEEKTEITAADEESSNTLSSETNVALPLNVVPSDKPSEAESHVNGDIVVEENPQLMLSQGPIMTVH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03185 474 MobiDBLite consensus disorder prediction 313 351 - -
Car04g03185 474 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 464 - -
Car04g03185 474 MobiDBLite consensus disorder prediction 274 432 - -
Car04g03185 474 MobiDBLite consensus disorder prediction 367 412 - -
Car04g03185 474 MobiDBLite consensus disorder prediction 100 179 - -
Car04g03185 474 MobiDBLite consensus disorder prediction 1 228 - -
Car04g03185 474 Coils Coil 241 268 - -
Car04g03185 474 MobiDBLite consensus disorder prediction 180 211 - -
Car04g03185 474 MobiDBLite consensus disorder prediction 250 269 - -
Car04g03185 474 Pfam Targeting protein for Xklp2 (TPX2) domain 226 297 IPR027329 -
Car04g03185 474 PANTHER PROTEIN WVD2-LIKE 4 1 464 IPR044833 GO:0008017
Car04g03185 474 MobiDBLite consensus disorder prediction 21 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03185 Car-Chr4 60188859 60192173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03185 - - gmx:100786958 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03185 04 60188859 60192173 Car04g03185 04 60188859 60192173 ECH
Car04g03185 04 60188859 60192173 Car05g02955 05 74499936 74505288 PCT