Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02953 ATGAATTGGATTGACAGAAACGGACAATTCCTCTTATCAAACTCTCTTAACTTCGCTTTTGCTTTTGTCACTACACCCGACGACACCACCAAGTTTCATTTGGTTATCCTCCACGTGGCAACTTCAACGGTTATTTGGACTGCAAATAGAGCAACACCCATTTCCAATTCTGATAATTTCGTCTTTGATAAAAAGGGTAATGCTTTTTTACAAAAAGATGGACTTTTTATTTGGTCTACCAACACAACCAACAAAGGGGTTTCTTCAATGCACTTGAAAGATAATGGAAATTTGGTTATGCTTGGGAAGGATAATACTACTTTGATTTGGCAAAGTTTTGATTTTCCAACTGATACTTTGATGCCTCAACAGCTTTTCAATGAGGGAATGAAACTCACTACTCAAACTAGTTCAAATAATTTGACCTATCTTCTTGAGATCAAATCTGGTAATGTTATTCTTTCAGCTGGTTTCAATGTTCCACAGATTTATTGGACTATGCAGAAGGATAACCGAAAAACTATCGATAAAGACGGTGATGTTGTTGCTTTTGCAAATCTCACTGACAATTCTTGGAGGTTTTATGATAAGAATAAGTCTTTGTTGTGGCAATTCATTTTCTCTGATGATGCAGGTGTAAATGATACTTGGGTTGCTGTTTTGGGAAAAGATGGTGTTATTACTTTCTCTAATCTCAATAGTGGTGGATCAAATGGTGCTTCTTCAACTAGAATACCACAGGATCCTTGTGGTACACCAGAACCTTGTGATCCTTACAACATATGCACAAGTAACCGTAGGTGTAGTTGTCCTTCTGTTCTTCCTAGTTGTAAACCGGGTTTTGTTTCTCCTTGTGATGGTAAATTACAAAAATCTATTCAATTTGTTAAAGCTGATGATGGATTGAGTTATTTTGCTCTTGATTTTATTCAGCCCTTTTCGAAAACCGATTTGGCCGGTTGTCAAAAGTCTTGCCGTGGAAATTGTTCTTGTCTTGCAATGTTCTTTCATAGAAGTTCAGGAAACTGTTTCCTTTTGGAAAGTTTAGGAAGTTTTCGGAAATCTGATGATGCTGCTGATTCTGGTTATGTTTCTTACATTAAAGTTTCAAGTGATCGAAGCAAAAGAGGAAGTGGAAACAGTAGTAATAAGCATGTTGTAGTTGTTGTGGTAATTGTCATATTAACTTTGTTTGTTATTTCTGTTATGCTCTTTGTTGGGGTTAGATACTACAGGAAAAAGAAAAGGTTACCTGAGTCTCCTAGAGAGGATTCTGAAGAGGACAATTTCTTGGAGAATTTAACCGGTATGCCGATTCGTTTCCGCTACAAAGATCTCGAACTAgcaactaataacttttctgtgaagcttggtcaaggtggttttggttcagtttatcaaggagttctacctgatggaactcaattagctgtgaagaagcttgaagaaatcattggtggaaggaaaaactATGATGCTAATGAGACATCAGAGAAATCCCATTTTCCTACTTTTGCTTTTAAGATGATGGAAGAAGGGAAAGTGAAAGATATACTTGATTCAGAGCTGAAAATTGATGAACATGATGATAGAGTATATTGTGCTATAAGGGTTGCATTGTGGTGTATACAAGAAGACATGTCAATGAGACCTTCTATGACTAAAGTTGTTCAAATGTTAGAGGGTCTTTGCATTGTGCCTAAACCACCAACAAGTTCTTATTTGGGCTCTCGCCTTTACTCTTCTATGTTCAAATCATCAAGTGAAGGTGGCACATCTTCTGCCCCATCAGATTGTAATAGTGATGCTTATTTATCAGCTGTTCGTCTTTCTGGCCCAAGATAA 1845 0.3442 MNWIDRNGQFLLSNSLNFAFAFVTTPDDTTKFHLVILHVATSTVIWTANRATPISNSDNFVFDKKGNAFLQKDGLFIWSTNTTNKGVSSMHLKDNGNLVMLGKDNTTLIWQSFDFPTDTLMPQQLFNEGMKLTTQTSSNNLTYLLEIKSGNVILSAGFNVPQIYWTMQKDNRKTIDKDGDVVAFANLTDNSWRFYDKNKSLLWQFIFSDDAGVNDTWVAVLGKDGVITFSNLNSGGSNGASSTRIPQDPCGTPEPCDPYNICTSNRRCSCPSVLPSCKPGFVSPCDGKLQKSIQFVKADDGLSYFALDFIQPFSKTDLAGCQKSCRGNCSCLAMFFHRSSGNCFLLESLGSFRKSDDAADSGYVSYIKVSSDRSKRGSGNSSNKHVVVVVVIVILTLFVISVMLFVGVRYYRKKKRLPESPREDSEEDNFLENLTGMPIRFRYKDLELATNNFSVKLGQGGFGSVYQGVLPDGTQLAVKKLEEIIGGRKNYDANETSEKSHFPTFAFKMMEEGKVKDILDSELKIDEHDDRVYCAIRVALWCIQEDMSMRPSMTKVVQMLEGLCIVPKPPTSSYLGSRLYSSMFKSSSEGGTSSAPSDCNSDAYLSAVRLSGPR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02953 614 ProSiteProfiles Bulb-type lectin domain profile. 1 113 IPR001480 -
Car05g02953 614 SUPERFAMILY alpha-D-mannose-specific plant lectins 44 134 IPR036426 -
Car05g02953 614 Pfam D-mannose binding lectin 43 126 IPR001480 -
Car05g02953 614 CDD B_lectin 4 116 IPR001480 -
Car05g02953 614 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 482 614 - -
Car05g02953 614 Gene3D Phosphorylase Kinase; domain 1 417 502 - -
Car05g02953 614 Gene3D - 5 114 IPR036426 -
Car05g02953 614 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 484 - -
Car05g02953 614 SMART blect_4 2 116 IPR001480 -
Car05g02953 614 CDD PAN_AP_plant 281 370 - -
Car05g02953 614 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 482 614 - -
Car05g02953 614 SUPERFAMILY Protein kinase-like (PK-like) 432 482 IPR011009 -
Car05g02953 614 SUPERFAMILY Protein kinase-like (PK-like) 483 586 IPR011009 -
Car05g02953 614 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02953 Car-Chr5 74490912 74493239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02953 481 572 Receptor kinase-like Gene Family AT5G20050 38.235 3.49e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02953 - - gmx:100791158 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02953 05 74490912 74493239 Car05g02953 05 74490912 74493239 ECH
Car05g02953 05 74490912 74493239 Car04g03186 04 60192177 60199355 ECH
Car04g03186 04 60192177 60199355 Car05g02953 05 74490912 74493239 PCT