Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g03186 ATGAGAAATCATTGTCCTCACTCCCATATTGTGCAAACCCTATGGTTGTGTTTGTGTTTCCTACTTTTCTTTGAAGTAGCTTTGGCTGGTATTCAAAAAATTGGCAAAATCTCTCCTGGACTTGAAGGCTCTCAAATGAATTGGATTGACAAGAATGGAATGTTTCTTGTCTCAAACAAAGGTGAATTTGGTTTTGGCTTTGTCACAACATCAAATAACAACACATTGTTTCTACTTGCAATAGTCCACATGGAAAGTTCCAAGGTGATTTGGACTGCAAATAGAGAATTTCCTGTTTCAAATTCTGATAAGTTTGTGTTTGATAAAAAGGGGAATGGTTATTTACAAAAAGGTTCAGTTTTGGTTTGGTCTACTAATACAAGTGACATGAATGTTTCTTCAATGGAATTAAAAGACACTGGAAATTTGGTTTTGCTAGGAAATGATGATAAAGTGATTATTTGGCAAAGTTTTAATCATCCAACTGATACATTAATGCCAATGCAAAACTTTACTCAGGGAATGAAACTTATTAGTGAACATGATTCTAACAACTTTACCTATGTCCTTGAAATTGAATCTGGTAATGTTATTCTTTACACTGGTTTACAAACTCCACAGCCTTATTGGTCTATGCGAAAAGATATTCGAAAAATCATCAATGAAAATGGCGAAGAGGTAGCTTTTGCAACTCTTGATGAAAACTCTTGGAAGTTCTATGACAATAAGAAATCTTTGTTGTGGCAATTTATTTTTGCTGATGATTCAGATGCTGCAAATTCTACTTGGATTGCTGTTTTAGGAAGTGATGGCTTTATCACTTTCTCAAATCTACAAAACAGTGATTCAATTGGTTCATCTACAACAAGAATTCCACAAGATTCTTGTAGTACACCACAACCTTGTGGTCCTTACAATATATGCATTGGTGACAAAAAATGTAGTTGCCCTTCTGTTCTTAGTTCTAGTCCTAGTTGCAAACCGGGTTTTGTCTGGCCTTGTAACTCAAAAAGTTCCATTGAGCTCATGAAAGGTGATGATGGACTTAACTACTTTGCACTTGGATTTCTTCCACCTTCTTCGAAAACCGATTTGATTGGCTGCAAAAATTCTTGCACTGAAAATTGTTCTTGCCTTGCTATGTTCTTCCACAACAGTTCAGGAAATTGTTACCTTTTGGATAGGATTGGAAGCTTTGAGAAAACTGATAATGATTCTGGTTTTGTCTCTTACATTAAAGTCTTGAGAGGCAGAAACACAGACACGGACACTAAAGAGAGTGGAAACAAGAATAAGCAAACGATAGTTGTTGTAATCATTGTGATACTAACATTGTTTGTCATTTTTTGTATGATCTTTGTAGGGCTTAGATACTTAAAGAAAAGGGAAAATTTGCCCGAATCTCGACCAGAGGATTCAGAAGACGACGACAATTTCTTGGACAATTTAACTAagataattggaggaaggaaaaactATGATCCTAATTATGAAACATCAGAGAAAATACATTTTCCAACATTTGCTTATAAGATGATGGAACAAGGAAATGTGAAAGATTTAGTTGATTTAGAAGTGAAAGTGTTTGAAAATGATGTGAGAGTTGAGATTGCTTTGAAAGTTGCATTGTTGTGCATACAAGAAGATATGTATTTGAGGCCTTCAATGAATAAAGTTGTTAAAATGCTTGAAGGTGTATGTGATGTTCCTAAGCTACCAAAAGGGTCTCCATTAGGTTCTCAATTTTATACAAATTTAGTAAGACCAACAAGTGAGAGTGGAACTTCTTCTGAACCAACAGAGGGGAATAGTGATGCATATCTCTATGCTAGTCGATCCTCAGATCCTGATCTTCTTCTCAGATCTCTTTCTTCTCTCTACTTCCCCCCCTTTTCTTACTTCTTTCAATCATTTTTCAATGCTCTTCACTTTCCACATTTTCATTCCATTTTGACTCTTTGGTCTACTGCTTTGTCGTCTAAATCCTATCTTTCTTCTTCAAAAGGATTAGAGTGA 2016 0.3492 MRNHCPHSHIVQTLWLCLCFLLFFEVALAGIQKIGKISPGLEGSQMNWIDKNGMFLVSNKGEFGFGFVTTSNNNTLFLLAIVHMESSKVIWTANREFPVSNSDKFVFDKKGNGYLQKGSVLVWSTNTSDMNVSSMELKDTGNLVLLGNDDKVIIWQSFNHPTDTLMPMQNFTQGMKLISEHDSNNFTYVLEIESGNVILYTGLQTPQPYWSMRKDIRKIINENGEEVAFATLDENSWKFYDNKKSLLWQFIFADDSDAANSTWIAVLGSDGFITFSNLQNSDSIGSSTTRIPQDSCSTPQPCGPYNICIGDKKCSCPSVLSSSPSCKPGFVWPCNSKSSIELMKGDDGLNYFALGFLPPSSKTDLIGCKNSCTENCSCLAMFFHNSSGNCYLLDRIGSFEKTDNDSGFVSYIKVLRGRNTDTDTKESGNKNKQTIVVVIIVILTLFVIFCMIFVGLRYLKKRENLPESRPEDSEDDDNFLDNLTKIIGGRKNYDPNYETSEKIHFPTFAYKMMEQGNVKDLVDLEVKVFENDVRVEIALKVALLCIQEDMYLRPSMNKVVKMLEGVCDVPKLPKGSPLGSQFYTNLVRPTSESGTSSEPTEGNSDAYLYASRSSDPDLLLRSLSSLYFPPFSYFFQSFFNALHFPHFHSILTLWSTALSSKSYLSSSKGLE 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g03186 671 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 484 615 - -
Car04g03186 671 SMART blect_4 47 161 IPR001480 -
Car04g03186 671 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 212 IPR036426 -
Car04g03186 671 CDD B_lectin 49 161 IPR001480 -
Car04g03186 671 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 485 - -
Car04g03186 671 Pfam D-mannose binding lectin 89 172 IPR001480 -
Car04g03186 671 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 484 615 - -
Car04g03186 671 CDD PAN_AP_plant 360 414 - -
Car04g03186 671 ProSiteProfiles Bulb-type lectin domain profile. 41 158 IPR001480 -
Car04g03186 671 Gene3D Transferase(Phosphotransferase) domain 1 483 581 - -
Car04g03186 671 Gene3D - 47 157 IPR036426 -
Car04g03186 671 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 3 485 - -
Car04g03186 671 Gene3D - 158 252 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g03186 Car-Chr4 60192177 60199355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g03186 485 569 Receptor kinase-like Gene Family AT1G56120 35.294 1.22e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g03186 - - gmx:100787500 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03186 04 60192177 60199355 Car04g03186 04 60192177 60199355 ECH
Car05g02953 05 74490912 74493239 Car04g03186 04 60192177 60199355 ECH
Car04g03186 04 60192177 60199355 Car05g02953 05 74490912 74493239 PCT